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Angela Chang

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Title: Angela Chang


1
ENVIRONMENTAL ANALYTICAL CHEMISTRY
  • Angela Chang
  • Mausami Desai
  • Katie Sovik

Winter 1999
2
  • PRINCIPLES
  • To experience and practice a variety of
    techniques useful in analyzing natural
    environmental processes. This includes complex
    biological, chemical, geological, and physical
    phenomena.
  • This laboratory utilizes some of the
    state-of-the-art instrumentation currently
    available, noting the accuracy of results that
    can be obtained.
  • The focus is split between a lesson on
    instrumentation and results analysis.

3
  • OBJECTIVE
  • This course specifically focuses on
    characterizing naturally occurring organic matter
    (NOM) because of its influence on the
    bioavailability and activity of pollution. The
    following analyses provide an introduction to
    important laboratory instrumentation while
    addressing a significant environmental material.

4
CONTENTS
  • Characterization of Total Organic Carbon
  • Capillary Electrophoresis
  • Potentiometric Methods
  • Glucosidic Proteinaceous Fractions of DOM
  • DOM Fingerprinting by PY-GC-MS

5
CHARACTERIZATION OF TOTAL ORGANIC CARBON
6
TOTAL ORGANIC CARBON
  • OBJECTIVE
  • Quantify overall organic carbon concentrations,
    and the dissolved and particulate fractions.
  • This is a generalized starting point in analyzing
    naturally occurring organic matter. Subsequent
    procedures determine more specific
    characterizations of the types of organic
    material or carbon.

7
TOTAL ORGANIC CARBON ANALYSIS
  • by Automated Carbon Analyzer
  • (UV Persulfate Oxidation)
  • by UV Spectroscopy

8
Automated Carbon Analyzer
  • 2 STEP TOC ANALYSIS PROCEDURE
  • Principals
  • By UV persulfate oxidation the sodium persulfate
    and phosphoric acid reagents convert all organic
    matter ? CO2
  • Measuring CO2 concentrations suggests organic
    carbon concentration
  • The infrared absorbance detector measures and
    quantifies this CO2 as ppm total C

9
UV PERSULFATE OXIDATION
  • REACTIONS
  • Excitation by UV light produces the primary
    oxidants (sulfate and hydroxide radicals)
  • S2082- ?v ? 2SO4- ?
  • H20 ? v ? H OH?
  • UV light also breaks down the organic material
    into radical functional groups.
  • R ? v ? R?

10
UV PERSULFATE OXIDATION
The combination of these 2 types of radicals
oxidizes the organic matter releasing CO2. R?
SO4- ? H20 ? nCO2 ... ? Ultimately a
measure of the amount of CO2 produced
quantifies the TOC
11
Dohrman DC-180 Carbon AnalyzerFlow Diagram
See next page for system operations explanation
12
System Operations
  • A pump fills the pickup loop with sample
  • Specific amounts of sample and acid are injected
    into the sparger
  • Acidification with H3PO4 in the sparger strips
    the inorganic (IC) and purgeable carbon (PuOC)
    from the sample. Separation of these fractions
    is aided by a bubbling flow of O2(g)
  • The nonparticulate organic carbon (NPOC)
    remaining in the liquid sample is sent to the UV
    reactor by another injection loop
  • UV radiation and the persulfate reagents oxidize
    all organics in the sample

13
System Operations (continued)
  • The CO2(g) and OH-?(g) are directed to the
    Gas/Liquid separator and bubbled with acidified
    water. A pH of 3 is maintained to aid the
    elimination of water from the CO2.
  • The infrared absorbance of water significantly
    overlaps with our focus, CO2. The removal of
    water in an osmotic pressure dryer is thus
    important.
  • In the Nondispersive Infrared Detector (NDIR) the
    absorbance of infrared radiation measures CO2.
  • The computer calculates and displays this as ppm
    C.

14
Interferences
  • There are 3 significant types of interferences
    related to the instrument procedure and
    components of the samples
  • The incomplete removal of inorganic and purgeable
    carbon in the sparger
  • The incomplete oxidation of the organic material
    in the UV reactor
  • Chloride present in the sample absorbing UV
    radiation

15
Calibration Curvecounts (15,500 /-
102.4)conc - 540.6 /- 1213
16
Calibration
  • 5 standards of known C-concentration were made
    from KHP (K-acid phtalate)
  • These concentrations ranged from 1-20 ppm
  • 2 blank samples were also analyzed and used to
    zero the calibration
  • The error on the intercept is larger than the
    actual intercept estimate and insignificant with
    respect to the origin
  • This intercept value can be disregarded
  • Considering this was our first time doing error
    analysis, we included all error estimates in our
    calculations.

17
Organic Carbon Calculations
Calculations are based on average values of
triplicate readings from the machine for each
sample
18
Organic Carbon Calculations
  • Dissolved particles are defined as that smaller
    than 0.45 ?m by the filters used
  • Suspended/colloidal materials ineffectively
    separated by filtration can thus be
    misrepresented as dissolved
  • This is a possible explanation for the large DOC
    values, misleadingly close to the TOC
  • The resultant small POC calculations suggest
    large amounts of colloidal material
  • The error carried over from the total and
    dissolved carbon values is greatly amplified in
    the POC calculations making them essentially
    insignificant

19
TOC - Sheboygan River
Corporate PCBs
Kohler Company
20
TOC - Lake Depue
21
Trends
  • Sheboygan River
  • The organic carbon levels are greatest upstream
    of the PCBs input
  • The Kohler Co. does not seem to effect the carbon
    levels
  • Overall there is about a 2 ppm downstream
    decrease in TOC
  • Lake Depue
  • No seasonal effects on TOC are noted
  • There is evidence that the lake is highly
    colloidal

22
UV SPECTROSCOPY
  • Principle Different compounds at certain
    wavelengths show unique and specific absorbances.
    The following methods attempt to quantify the
    fractions or concentrations of different types of
    organic matter from absorbance spectra.

23
UV SPECTROSCOPY
  • Correlation methods in particular, have been used
    as estimates in characterizing
  • Humidification
  • Aromaticity
  • TOC
  • The UV-254 correlation with TOC useful for
    specific water types has continued to be
    mentioned and documented because of the
    simplicity of the procedure and the portability
    of spectroscopy equipment. Even though automated
    carbon analyzers are more widely accurate, this
    method has shown some advantages.

24
UV SPECTROSCOPY
  • Transmittance is the fraction of incident light
    transmitted by a solution
  • This cannot be measured directly in the lab due
    to reflective interferences with any container
    used to hold the sample
  • Beers Law (For use with dilute solutions only)
  • Absorbance - log T ?bc
  • ? molar absorptivity L/molecm
  • b the path length through the solution
  • c concentration

25
Spectrophotometer
1 - D2 lamp 2 - Grating 1 3 - Entrance Slit 4 -
Grating 2 5 - Exit Slit 6 - Chopper 7 - Sample
Reference Positions 8 - Chopper 9 -
Photo Tube
26
Spectrophotometry
  • Mirrors and gratings redirect and disperse the
    radiation
  • The slits limit the radiation range allowing
    successively isolated wavelengths to be selected
  • The rotating chopper wheels alternately direct
    the light beam through the sample and reference
  • A distilled water reference is required to zero
    the interference effects of the cuvette
  • Other Interferences include
  • chloride absorbance
  • particulate scattering
  • non-absorbing organic material

27
Absorption Ratios Characterizations
Although negative values are useless, the ratios
developed have been used to characterize soil
type and degree of humidification
28
E4/E6 E2/E3 Ratios Humic Substances
  • Constitute a large portion of the organic matter
    in soils
  • Product of the degradation of plant and animal
    materials microorganism activity
  • Aromatic
  • acidic
  • Hydrophilic
  • Flexible Polyelectrolytes
  • Lignin is the second most abundant polymer
    synthesized by plants and a structural unit for
    humics

29
Biochemistry Significance
  • The aromatic building blocks of humic substances
    are connected by flexible low energy bonds
  • Reactions and voids aggregate/trap other
    materials
  • Metals ions and toxic organic pollutants are
    stabilized in complexes

30
Humidification Analysis E4/E6 E2/E3 Ratios
  • Even though our results are inconclusive
  • low E4/E6 ratios have been found to indicate a
    high degree of aromatic humic constituency
  • High E4/E6 ratios indicate low aromaticity, or a
    high degree of aliphatic structure

E4/E6
Humic Acids
3.8 - 5.8
Fulvic Acids
7.6 - 11.5
31
Humidification Analysis E4/E6 E2/E3 Ratios
  • Less data has been compiled for E2/E3 ratios and
    thus they are less reliable although certain
    characterizations have been documented

E2/E3
Strongly humic and oligotrophic lakes
4.0
Chlorolignin
4.2
5.7
Lignin
32
Absorption Ratios Characterizations
33
Aromaticity
  • Aromaticity of organic matter is a specific
    structural factor significant to interactions
    with pollutants, and their stabilization
  • The higher the aromatic fraction of DOM, the
    higher the xenobiotic binding capacity
  • A simple equation for Aromaticity has been
    developed that is dependant on molar absorptivity
  • ? A/bc
  • ? Aromaticity 0.05 ? 6.74
  • Primary assumption all organic matter absorbs
    the same at any wavelength and that also absorbs
    as the KHP standard, i.e. the ? of all organic
    matter is the same. This assumption in actuality
    is not valid, as ? varies for different types of
    organic matter.

34
TOC Surrogate
  • UV absorbance at 254 nm is documented as a widely
    used substitute for TOC
  • We analyzed the filtered samples in the
    spectrophotometer and thus ultimately compared
    DOC approximations from the 2 methods

35
Non-Acidified Pseudo Calibration Curveabs
(0.01953 /- 0.002089)(ppm C) - 0.01740 /-
0.01393
36
Non-Acidified Pseudo Calibration Curve
  • Only 3 standards solutions ranging from 5 - 20
    ppm C, and a blank were analyzed
  • the standards were diluted from a KHP stock
  • the samples were zeroed by the spectrophotometer
  • the 10 ppm standard introduced error

37
TOC - Comparisons
The ppm C derived by the UV-254 correlation is
doubly overcompensated. Greater error values
must also be noted as a result of the limited
calibration.
38
TOC Comparisons - Sheboygan River
39
TOC Comparisons - Lake Depue
40
Note
  • The effects of the colloidal particles noted in
    the POC calculations is greatly amplified in the
    UV-254 method
  • The scattering action of the colloidal material
    is one explanation for high absorbance readings
    and the overcompensation for TOC
  • It is common belief that UV persulfate oxidation
    and automated carbon analysis is the more
    accurate method in determining TOC
  • Although this exercise allowed a realization of
    the potential advantages and real limitations of
    experimental procedures

41
CAPILLARY ELECTROPHORESIS
42
Capillary Electrophoresis
  • OBJECTIVE
  • Determination of concentration of specified ions
    in sample waters

43
Introduction
  • Electrophoresis is the migration of ions in
    solution under influence of electric field. In a
    typical capillary electrophoresis (CE)
    application, use an electric field of 15-30 kV to
    separate the components inside a fused silica
    capillary tube.
  • Since different solutes have different
    mobilities, they will migrate through the
    capillary at different speeds
  • This gives the extraordinary resolution and
    separation of many ionic species.

44
Electrophoresis
  • When an ion with charge q is placed in an
    electric field E, the force on the ion is
  • F qE
  • In solution, the other major force on the ion is
    the retarding frictional force fvep, where vep
    is the electrophoretic velocity and f is the
    coefficient of friction
  • vep qE/f µepE
  • The constant of proportionality between speed of
    ion and the applied electric field is
  • µep
  • µep is proportional to the charge on the ion and
    inversely proportional to the friction
    coefficient.

45
Electroosmosis
  • The inside surface of the silica capillary is
    covered with silanol (Si-OH) groups which carry a
    negative charge above pH2
  • These negative charges on surface induce cations
    to neutralize some of the surface charge
  • The constant of proportionality between
    electroosmotic velocity (veo) and applied field
    is the electroosmotic mobility
  • µeo
  • A relationship for the electrophoretic effect is
  • veoµeoE

46
Diagram Hydrodynamic Velocity Profile
  • (a) Positive charges move toward cathode,
    absorbed on surface of glass
  • (b) More dispersion created by velocity profile
    because pushed from middle

47
Apparent Mobility
  • The apparent (or observed) mobility (?app) of an
    ion is the sum of the electrophoretic mobility of
    the ion and the electroosmotic mobility of the
    solution
  • ?app ?ep ?eo
  • For a cation moving in the same direction as the
    electroosmotic flow, the mobilities have the same
    sign and then ?app is greater than ?ep

48
Diagram Solute Mobilities
  • (a) Optimize electrolyte conditions to make
    separation larger and force ions out of system
    faster
  • (b) Use TTAB as reversal compound to separate
    anions out first
  • (c) Sum of all ions out of sides of capillary

49
Diagram Apparatus
  • Both ends of capillary placed into electrolyte
  • Sample injected by siphon effect
  • Insert capillary into vial and elevate
  • After injection, vial returned to normal height
  • Apply voltage of 15kV
  • Ions migrate through electrolyte
  • Indirect detection

50
Br-
SO42-
Cl-
NO3-
51
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52
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53
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54
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56
Sample Data
57
Cl-
SO42-
NO3-
58
1. DASS 2. WDNR 3. RP 4. KCL 5. EP
59
Analysis
  • NO3 drops significantly from May to November
  • Cl- and SO4 increased overall in Lake Depue
  • Cl- a bit higher along entire Sheboygan River
    compared to other ions

60
POTENTIOMETRIC METHODS
61
Potentiometric Methods
  • OBJECTIVE
  • Determination of
  • acid/base properties of
  • samples.

62
Alkalinity CT
  • Representation of the buffer capacity of a water
    sample or the ability of the water to neutralize
    strong acid.
  • Alk 2CO32- HCO3- OH- - H
  • Measure of alkalinity due to carbonate system
  • CT H2CO3 HCO3- CO32-

63
Computer Automated Titration SystemME-10 Analyzer
  • Components
  • Automatic burette
  • Potentiometer
  • Glass Electrode
  • Windows Interface program controls ME-10
    Analyzer unit during titration and records data
    (volume additions and potential)
  • Data analysis to determine the equivalent volumes
    and equilibrium constants

64
Titration System Setup
Glass Electrode (w/ reference electrode and ion
selective membrane)
Titrant
Computer
Sample mixer
Burette
65
Glass Electrode
  • Measures pH
  • The indicator electrode measures potential
    difference across a glass membrane between 0.1 M
    HCl and the sample solution.
  • The glass electrode has two key components
  • reference electrode
  • ion selective glass membrane

66
Reference Electrode
  • Within a tube in the indicator glass electrode
  • The reference electrode contains a small volume
    of dilute HCl and AgCl. The Ag wire forms a
    reference electrode creating a link to the
    potential measuring device. This electrode should
    obey Nernst equation when constant temperature
    and ionic strength are maintained.
  • The reference electrode provides a base potential
    from which changes in potential can be measured.

67
Ion Selective Membrane
  • The ion selective glass membrane is sealed into
    one
  • end of the glass tube.
  • When hydrated, it allows for the interaction
    between singly charged cations (electric
    conductivity) in the glass and protons from the
    solution.
  • H NaGl- ? Na HGl-
  • More specifically when Na is low, conduction
    within the hydrated layer involves the movement
    of hydrogen ions by the following reactions
  • H Gl- ? HGl- (between glass and sample
    solution)
  • HGl- ? H Gl- (between internal solution
    and glass)

68
Typical Electrode System for Measuring pH
69
Measurement through Electrode
  • The equilibrium position of these 2 reactions are
    determined by H in the solutions on the two
    sides of the membrane.
  • The surface where greater dissociation occurs
    becomes negative w/respect to other surface with
    less dissociation.
  • A boundary potential Eb develops across the
    membrane which is sensed by the analyzer and
    recorded by the computer.
  • The potential change is recorded in mVolts along
    with the corresponding volume of acid added

70
Measurement through Electrode
  • Since constant temperature and ionic strength are
    maintained, the system obeys the Nernst equation.
  • Eb is Emv where
  • Emv EG kT ln H
  • EG Potential normal of the glass electrode for
    H1M
  • Includes reference potential and
    corrects for
  • departure from ideal behavior
  • k R/F (R Gas constant, F Faradays
    constant)
  • T Room temperature in Kelvin

71
Calibration of Electrode System
  • Titrated solution of 5 mL 0.1 M KCl (to maintain
    ionic strength) and distilled water with 0.1 M
    HCl at T 22o C or 295 K
  • Verifies Nernst Equation by obtaining linear
    relationship by plotting pH vs.. change in
    potential where pH is
  • ln H ln (Vad tHCl)/(Vo
    Vad)
  • Note tHCl HCL0.1M
  • Theoretically under these conditions should be
  • kT 58.54, the experimentally obtained value
    was
  • kT 57.51 a variation of less than 2

72
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73
Error Sources in Potentiometric Method
  • Variation in temperature of solution possibly due
    to constant stirring
  • Variation in ionic strength
  • The Eppendorf was not sealed properly and
  • additions of KCL to samples may have varied
  • Junction Potential Potential develops from the
    difference in composition between sample and
    titrant. This potential arises from the unequal
    distribution of cations and anions and the
    different rates at which the species migrate. As
    long as ionic strength is maintained this
    potential is reduced.

74
Gran Method
  • Priniciple Graphical procedure based on
  • knowledge that added increments of strong acid
  • linearly increase H or decrease OH-,
    likewise
  • added increments of strong base decrease H or
  • increase OH-.
  • A titration curve is obtained by plotting volume
    added vs. potential E in mV. In this lab strong
    acid is added to determine the alkalinity of our
    samples so we know that the lower part of the
    curve is composed of base, while the upper part
    of the curve is composed of acid.

75
Potentiometric Titration-DASS sample
200
180
acidic
160
140
120
100
80
60
V2 2.503/- 0.0159
40
mV
20
0
-20
0
0.2
0.4
0.6
0.8
1
1.2
1.4
1.6
1.8
2
2.2
2.4
2.6
2.8
3
3.2
3.4
3.6
3.8
4
-40
-60
-80
basic
-100
-120
-140
-160
V1 0.1204/-0.0074
Volume Added
76
Gran Method cont.
  • At the midpoint the base A- acid HA.
  • All base is titrated at the endpoint or
    equivalence point of the titration and is
    represented by an inflection point.
  • Thus, using this method, it is possible to
    determine the carbonate system equivalence
    points, assuming that the alkalinity of our
    samples is due to the carbonate system.
  • Determine equilibrium constant for carbonate
    system

77
Gran Plots F1
  • For volumes gt than the second equivalence point,
    volume v2
  • H gtgt HCO3-, CO32-, and OH- together
  • So the following relationship is true
  • F1 (vo vad) H (vad - v2)tHCl
  • Note tHCl HCL0.1M
  • When plotted against vad, the function is linear
    beyond v2 so
  • F1 0 for vad v2

78
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79
Gran Plots F2
  • Between the first and second equivalence points
    volumes, v1 and v2
  • H2CO3 gtgt H - CO32- - OH-
  • HCO3- gtgt CO32- OH- - H
  • Similarly the following relationship holds
  • F2 (v2 - vad)H (vad - v1)K1
  • F2 is linear for volumes less than v2 when
    plotted against vad and F2 0 for vad v1, with
    the slope of F2 K1 the equilibrium constant for
  • H2CO3 ? HCO3- H

80
K 6.2512/-2.65E-3
81
Alkalinity CT Results
  • Determined by the following relationships
  • Alk (v2 tHCl)/ v0 CT ((v2 -
    v1) tHCl)/ v0
  • Alkalinity CT
  • DASS 5.0007E-03 4.7601E-03
  • WDNR 5.0060E-03 4.8310E-03
  • RP 5.0271E-03 4.7971E-03
  • KCL 5.0620E-03 4.8210E-03
  • EP 5.0870E-03 4.8160E-03
  • MAY 2.7100E-03 2.5910E-03
  • NOV 4.4810E-03 4.2230E-03
  • both are molar
    values M

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84
Analysis
  • Sheboygan River Alkalinity increases moving
    downstream along the, while CT remains
    essentially constant varying around 4.8E-3 M
  • Lake Depue Alkalinity and CT increase in the
    winter nearly doubling, most likely due to the
    course of productivity throughout the year

85
GLUCOSIDIC PROTEINACEOUS FRACTIONS OF DOM
86
GLUCOSIDIC PROTEINACEOUS FRACTIONS OF DOM
  • OBJECTIVE
  • Qualitative analysis of simple sugars and amino
    acid fractions of DOM through colorimetric and
    fluorescence methods. These residuals of
    biological activity and decay are significant in
    determining COD.

87
GLUCOSIDIC FRACTION
  • COLORIMETRY/SPECTROSCOPY
  • Reaction of phenol and H2SO4 (Dubois reagents)
    with the samples breaks down complex sugars.
  • The attachment of phenol to the reduced sugar
    monomers produces compounds of a stable yellowish
    color.
  • Spectrometric measurement of the intensity of
    color quantifies the specific fraction of sugars.

88
Spectrometer
1 - D2 lamp 2 - Grating 1 3 - Entrance Slit 4 -
Grating 2 5 - Exit Slit 6 - Chopper 7 - Sample
Reference Positions 8 - Chopper 9 -
Photo Tube
89
Spectrophotometry
  • Mirrors and gratings redirect and disperse the
    radiation
  • The slits limit the radiation range allowing
    successively isolated wavelengths to be selected
  • The rotating chopper wheels alternately direct
    the light beam through the sample and reference
  • A reference sample is required to zero the
    interference effects of the cuvette.
  • Other Interferences include
  • particulates scattering
  • non-absorbing organic material

90
GLUCOSIDIC CALIBRATION _at_ 480 nm
No distinction can be made between the 0 and 10
uM concentrations. Most of our data points fall
within this range. The calibration from this
method therefore does not lead to conclusive
results.
91
GLUCOSIDIC CALIBRATION _at_ 490 nm
92
GLUCOSIDIC RESULTS480 nm
As noted, all of our data points refer to
concentrations less than 10 uM with the exception
of samples EP and May. In general, this did not
provide us with useful data for analysis.
93
GLUCOSIDIC RESULTS490 nm
94
ANALYSIS
  • The glucosidic fraction of TOC increases
    downstream in the Sheboygan River.
  • The TOC values previously determined show a
    slight decreasing trend downstream.
  • The Lake Depue fraction is higher in May than
    November.
  • Using glucose as a representation of all other
    sugars is not a good quantitative method.

95
Total Hydrolyzable Free Amino Acids(Proteinaceous
Fraction)
  • Samples reacted with OPA-MERC solution to bind
    with aromatic compounds, such as proteins
  • Fluorometric measurement quantifies proteinaceous
    fraction

96
FLUORESCENCE
  • The fluorometer energy source excites electrons
    of organic compounds bound to OPA-MERC
  • High energy state is unstable
  • As electrons return to a more stable ground
    state, visible light is emitted
  • From the intensity of emitted light,
    proteinaceous fractions can be determined

97
Fluorometer
98
Procedure
Procedure
Procedure
  • Simple, low-cost, and easy to use
  • Mercury lamp for fluorescence excitation
  • Source beam split near source into a reference
    beam and a sample beam
  • Both beams pass through primary filter
  • Sample beam causes emission of fluorescent
    radiation

99
Proteinaceous Calibration
Like the glucosidic calibration the amount of
scattering within the data shows that this method
is unreliable at these concentrations.
100
Proteinaceous Results
No apparent trends are noted.
101
DOM FINGERPRINTING BY PY-GC-MS
102
DOM FINGERPRINTING
  • OBJECTIVE
  • To characterize the constituents of dissolved
    organic matter, accomplished by breaking down the
    DOM through a 3-step process.

The data obtained in this procedure is based on a
wetland sample taken on August 6,1998
103
PY-GC-MS METHOD
  • STEP 1 PYROLYSIS
  • In an inert environment and at a controlled
    temperature, the organic matter from the
    concentrated water samples is thermally degraded
  • Bonds within the OM are broken and rearranged
  • Predictable and reproducible fragments form

104
PY-GC-MS METHOD
  • STEP 2 GAS CHROMATOGRAPHY
  • The pyrolyzed fragments are drawn into the GC
    column
  • The fragments migrate through the column by
    action of a He mobile phase flushing the system
  • affinity to a stationary phase (the silica
    column) results in varied migrations rates for
    the different types of fragments

105
Gas Chromatograph
106
PY-GC-MS METHOD
  • STEP 3 MASS SPECTROMETRY
  • A detector senses when the organic matter
    fragments reach the end of the column
  • This signal is plotted versus time producing a
    chromatogram
  • Specific fragments can be identified by their
    characteristic retention times

107
Chromatogram
1
1. Unknown aliphatic 2. Acetic Acid 3. Propanoic
Acid 4. Dimethyl-Propanedioic Acid 5. Butanoic
Acid 6. Hexanoic Acid 7. Butenoic Acid 8. Phenol
2
8
3
4
56
7
108
PY-GC-MS METHOD
  • STEP 3 CONTINUED MASS SPECTROMETRY
  • In the mass spectrometer the fragments are
    ionized
  • An alternating current through the 4 poles of the
    mass spec separates the ionized fragments by
    their mass/charge ratios
  • The mass spec plots the spectrum of the ionized
    fragments mass/charge ratio versus abundance

109
Quadrupole Mass Spectrometer
  • the fragments of the specific mass/charge ratio
    wanted at any one time pass between the rods
    without being neutralized
  • the other fragments are neutralized by contact
    with the rod walls

110
PY-GC-MS METHOD
  • STEP 3 CONTINUED MASS SPECTROMETRY
  • The software program used in conjunction with
    this method performs an online library (NIST)
    search to match the mass spectra of a fragment to
    known compounds.
  • The compounds detected in our sample
  • unknown aliphatic butanoic acid
  • acetic acid hexanoic acid
  • propanoic acid butenoic acid
  • dimethyl-propanoic acid phenol

111
Note
  • If we had samples leftover to analyze, the
    PY-GC-MS method would have been beneficial in
    providing structural feature fingerprints serving
    as chemical markers within our samples. Trends
    may be depicted.
  • Analysis methods can allow results comparisons
    with other methods. Such as with determination
    of the glucosidic fraction. PY-GC-MS analysis is
    enhanced when used in conjunction with data from
    other methods.

112
Evaluation
  • We have improved our laboratory skills
  • Through this course we have gained an
    understanding of analytical methods currently
    being used in the environmental field
  • We not only have a more comprehensive
    understanding of scientific terminology, we are
    capable of analyzing data in a more applicable
    way
  • In previous laboratory courses, error analysis
    was not required. We have gained an
    understanding of how results are obtained and how
    error can limit their relevance

113
References
  • C45 Winter 1999 Lab Manual
  • Samuel Webb, Jill Kostel, Tanita Sirivedhin -
    technical advice
  • Leary, Skoog. Principles of Instrumental
    Analysis
  • Chen, Senesi, Schnitzer. Information Provided
    on Humic Substances by E4/E6 Ratios, Soil
    Science Society of America.
  • Aiken, Chin, OLoughlin. Molecular Weight,
    Polydisperity and Spectroscopic Properties of
    Aquatic Humic Substances, Environmental Science
    Technology.
  • Dean, Dobbs, Wise. The Use of Ultra-Violet
    Absorbance fo rMOnitoring the Total Organic
    Carbon Content of Water and Wastewater, Water
    Resources.
  • Kukkonen. Effects of Lignin and Chlorolignin in
    Pulp Mill Effluents on the Binding and
    Bioavailability of Hydrophobic Organic
    Pollutants, Water Resources.
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