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QTL Cartographer PowerPoint PPT Presentation
QTL Cartographer - Still a work in progress: not yet integrated into Preplot. Visualization Schematic ... Display graphs with Preplot and GNUPLOT. Computing Environment. Programs ...
Still a work in progress: not yet integrated into Preplot. Visualization Schematic ... Display graphs with Preplot and GNUPLOT. Computing Environment. Programs ...
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Markers, QTL mapping and marker-assisted selection PowerPoint PPT Presentation
Markers, QTL mapping and marker-assisted selection - MARKER-ASSISTED BREEDING FOR RICE IMPROVEMENT. Bert Collard & David Mackill. Plant Breeding, Genetics and Biotechnology (PBGB) Division, IRRI ...
MARKER-ASSISTED BREEDING FOR RICE IMPROVEMENT. Bert Collard & David Mackill. Plant Breeding, Genetics and Biotechnology (PBGB) Division, IRRI ...
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QTL Mapping in Humans PowerPoint PPT Presentation
QTL Mapping in Humans - QTL Mapping in Humans Lon Cardon, Stacey Cherny University of Oxford Goncalo Abecasis University of Michigan Pak Sham Institute of Psychiatry, King s College, London
QTL Mapping in Humans Lon Cardon, Stacey Cherny University of Oxford Goncalo Abecasis University of Michigan Pak Sham Institute of Psychiatry, King s College, London
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Bayesian Hierarchical Model for QTLs PowerPoint PPT Presentation
Bayesian Hierarchical Model for QTLs - www. geocities.com/ResearchTriangle/Forum/4463/anigenetics.gif
www. geocities.com/ResearchTriangle/Forum/4463/anigenetics.gif
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Introduction to QTL mapping PowerPoint PPT Presentation
Introduction to QTL mapping - Title: Slide 1 Author: manuelF Last modified by: Manuel Allen Revez Ferreira Created Date: 5/17/2004 11:54:34 PM Document presentation format: On-screen Show
Title: Slide 1 Author: manuelF Last modified by: Manuel Allen Revez Ferreira Created Date: 5/17/2004 11:54:34 PM Document presentation format: On-screen Show
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Statistical issues in QTL mapping in mice PowerPoint PPT Presentation
Statistical issues in QTL mapping in mice - Statistical issues in QTL mapping in mice Karl W Broman Department of Biostatistics Johns Hopkins University http://www.biostat.jhsph.edu/~kbroman
Statistical issues in QTL mapping in mice Karl W Broman Department of Biostatistics Johns Hopkins University http://www.biostat.jhsph.edu/~kbroman
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QTL Mapping in Humans PowerPoint PPT Presentation
QTL Mapping in Humans - Institute of Psychiatry, King's College, London. 3 Stages of Genetic Mapping ... in QTL identification (aka: gratuitous promotion of advanced workshop): Cardon ...
Institute of Psychiatry, King's College, London. 3 Stages of Genetic Mapping ... in QTL identification (aka: gratuitous promotion of advanced workshop): Cardon ...
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Welcome to the Quantitative Trait Loci (QTL) Tutorial PowerPoint PPT Presentation
Welcome to the Quantitative Trait Loci (QTL) Tutorial - Gramene v. 20 Welcome to the Quantitative Trait Loci (QTL) Tutorial This tutorial will describe how to navigate the section of Gramene that provides information on ...
Gramene v. 20 Welcome to the Quantitative Trait Loci (QTL) Tutorial This tutorial will describe how to navigate the section of Gramene that provides information on ...
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QTL mapping in mice PowerPoint PPT Presentation
QTL mapping in mice - Additivity or non-additivity: F2. 18. The simplest method: ANOVA. Split mice into groups ... comparison), when a QTL contributing to the trait is located at a ...
Additivity or non-additivity: F2. 18. The simplest method: ANOVA. Split mice into groups ... comparison), when a QTL contributing to the trait is located at a ...
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QTL Mapping Using Mx PowerPoint PPT Presentation
QTL Mapping Using Mx - these are 'WEIGHTS' 3 Compute likelihood of phenotype data under each of 3 IBD conditions ... nvar Free !familial background. Z Lower nvar nvar Free !unique ...
these are 'WEIGHTS' 3 Compute likelihood of phenotype data under each of 3 IBD conditions ... nvar Free !familial background. Z Lower nvar nvar Free !unique ...
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Chicken QTL Phenotype Ontology PowerPoint PPT Presentation
Chicken QTL Phenotype Ontology - Chicken QTL Phenotype Ontology. Wilfrid Carr , Jan Aerts, Dave ... Integrate the QTL data to the Chicken Genome. How are we ... Causative genes (11 genes, ...
Chicken QTL Phenotype Ontology. Wilfrid Carr , Jan Aerts, Dave ... Integrate the QTL data to the Chicken Genome. How are we ... Causative genes (11 genes, ...
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- MIQAS - Minimal Information for QTLs and Association Studies PowerPoint PPT Presentation
- MIQAS - Minimal Information for QTLs and Association Studies - 'From the 17th generation 15 males from the L line and 15 females from the H line ... causative genes within QTL - maybe in future. Jan Aerts. status ...
'From the 17th generation 15 males from the L line and 15 females from the H line ... causative genes within QTL - maybe in future. Jan Aerts. status ...
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Welcome to the Quantitative Trait Loci (QTL) Tutorial PowerPoint PPT Presentation
Welcome to the Quantitative Trait Loci (QTL) Tutorial - Click on the column titles to view a sorted display list. Click for a list of these QTL ... card the linkage groups with the names of '1a', '1b', and so forth, ...
Click on the column titles to view a sorted display list. Click for a list of these QTL ... card the linkage groups with the names of '1a', '1b', and so forth, ...
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QTL as a measure PowerPoint PPT Presentation
QTL as a measure - Strains, ecotypes, subspecies accumulate many more mutations (Natural ... Small additive effects / epistatic loci are not detected and may require further ...
Strains, ecotypes, subspecies accumulate many more mutations (Natural ... Small additive effects / epistatic loci are not detected and may require further ...
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Mapping and use of QTL for marker-assisted improvement of meat quality in pigs PowerPoint PPT Presentation
Mapping and use of QTL for marker-assisted improvement of meat quality in pigs - Mapping and use of QTL for markerassisted improvement of meat quality in pigs
Mapping and use of QTL for markerassisted improvement of meat quality in pigs
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GridQTL: High performance QTL analysis via the Grid PowerPoint PPT Presentation
GridQTL: High performance QTL analysis via the Grid - George Seaton, Sara Knott, Chris Haley, Peter Visscher ... Knott, De Koning, Haley, Visscher. science & e-science coordination. All PI ...
George Seaton, Sara Knott, Chris Haley, Peter Visscher ... Knott, De Koning, Haley, Visscher. science & e-science coordination. All PI ...
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Power calculation for QTL association (discrete and quantitative traits) PowerPoint PPT Presentation
Power calculation for QTL association (discrete and quantitative traits) - 1. Calculate critical value (Inverse central 2) Alpha. 0 (under ... Family-based VC association: between and within tests. what is the impact of sibship size? ...
1. Calculate critical value (Inverse central 2) Alpha. 0 (under ... Family-based VC association: between and within tests. what is the impact of sibship size? ...
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QTL Mapping in Natural Populations PowerPoint PPT Presentation
QTL Mapping in Natural Populations - QTL Mapping in Natural Populations Basic theory for QTL mapping is derived from linkage analysis in controlled crosses There is a group of species in which it is not ...
QTL Mapping in Natural Populations Basic theory for QTL mapping is derived from linkage analysis in controlled crosses There is a group of species in which it is not ...
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Power in QTL linkage analysis PowerPoint PPT Presentation
Power in QTL linkage analysis - A significant' result means that we can reject the null hypothesis ... that the p value is the probability of the null hypothesis being true ...
A significant' result means that we can reject the null hypothesis ... that the p value is the probability of the null hypothesis being true ...
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QTL Mapping in Extended Halfsib Families PowerPoint PPT Presentation
QTL Mapping in Extended Halfsib Families - ADSA/ASAS Annual Meeting, Phoenix, AZ, June 22-26, 2003. QTL ... Comments? Critics? Suggestions? Correspondence: Natascha Vukasinovic (nvukasin@charter.net) ...
ADSA/ASAS Annual Meeting, Phoenix, AZ, June 22-26, 2003. QTL ... Comments? Critics? Suggestions? Correspondence: Natascha Vukasinovic (nvukasin@charter.net) ...
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Detection of QTL in beef cattle PowerPoint PPT Presentation
Detection of QTL in beef cattle - What have we used to identify QTL? What have we found? Where are we validating them? ... Where are we validating them? Blackie. Bonzo. GENOME SCAN RESULTS IN ...
What have we used to identify QTL? What have we found? Where are we validating them? ... Where are we validating them? Blackie. Bonzo. GENOME SCAN RESULTS IN ...
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Factors critical to successful QTL mapping PowerPoint PPT Presentation
Factors critical to successful QTL mapping - (1 to 3 absolutely critical for genetic analysis; ... Plant height. Anthesis date. Stomatal conductance Sunco/Tasman. Plant height. Anthesis date ...
(1 to 3 absolutely critical for genetic analysis; ... Plant height. Anthesis date. Stomatal conductance Sunco/Tasman. Plant height. Anthesis date ...
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QTL Database Round Table Discussion: PowerPoint PPT Presentation
QTL Database Round Table Discussion: - 2:35 - Open discussion on Minimal Standards (Dave Burt, facilitator) ... 4:55 - Future Directions. 5:00 - Concluding remarks (Jim Reecy and Dave Burt) ...
2:35 - Open discussion on Minimal Standards (Dave Burt, facilitator) ... 4:55 - Future Directions. 5:00 - Concluding remarks (Jim Reecy and Dave Burt) ...
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QTL Analysis of Flavonoid Synthesis PowerPoint PPT Presentation
QTL Analysis of Flavonoid Synthesis - QTL analyses of maysin concentration in populations 1, 2, and ... Maize silk maysin concentration and corn earworm antibiosis: QTLs and ... concentration ...
QTL analyses of maysin concentration in populations 1, 2, and ... Maize silk maysin concentration and corn earworm antibiosis: QTLs and ... concentration ...
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Quantitative trait locus (QTL) analysis: Establishing the linkage between traits and genes PowerPoint PPT Presentation
Quantitative trait locus (QTL) analysis: Establishing the linkage between traits and genes - Title: PowerPoint Presentation Author: pfrender Last modified by: Michael Pfrender Created Date: 2/4/2002 10:57:07 PM Document presentation format
Title: PowerPoint Presentation Author: pfrender Last modified by: Michael Pfrender Created Date: 2/4/2002 10:57:07 PM Document presentation format
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TAMU Bovine QTL db and viewer PowerPoint PPT Presentation
TAMU Bovine QTL db and viewer - Provide a database of publicly available QTL in cattle. ... Addition of SNP/haplotype database and integration with genome browser and QTL viewer. ...
Provide a database of publicly available QTL in cattle. ... Addition of SNP/haplotype database and integration with genome browser and QTL viewer. ...
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QTL mapping in mice, completed. PowerPoint PPT Presentation
QTL mapping in mice, completed. - n backcross mice; M markers. xij = genotype (0/1) of mouse i at marker j ... Mouse i has phenotype yi and marker data mi. ... and phenotypes for all mice ...
n backcross mice; M markers. xij = genotype (0/1) of mouse i at marker j ... Mouse i has phenotype yi and marker data mi. ... and phenotypes for all mice ...
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Epistatic QTL for gene expression in mice; potential for BXD expression data PowerPoint PPT Presentation
Epistatic QTL for gene expression in mice; potential for BXD expression data - Epistatic QTL for gene expression in mice; potential for BXD expression data Dirk-Jan de Koning*, rjan Carlborg*, Robert Williams , Lu Lu , Chris Haley*
Epistatic QTL for gene expression in mice; potential for BXD expression data Dirk-Jan de Koning*, rjan Carlborg*, Robert Williams , Lu Lu , Chris Haley*
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Identifying QTLs in experimental crosses PowerPoint PPT Presentation
Identifying QTLs in experimental crosses - n (100 1000) F2 progeny. yi = phenotype for individual i. gij = genotype for indiv i at marker j ... Estimate epistatic effects. Analysis of single QTL: ...
n (100 1000) F2 progeny. yi = phenotype for individual i. gij = genotype for indiv i at marker j ... Estimate epistatic effects. Analysis of single QTL: ...
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Bull selection based on QTL for specific environments PowerPoint PPT Presentation
Bull selection based on QTL for specific environments - ... impact on competitiveness and the sustainability of the dairy cattle industry. ... of QTL are based on crosses of genetically distinct breeds or inbred lines. ...
... impact on competitiveness and the sustainability of the dairy cattle industry. ... of QTL are based on crosses of genetically distinct breeds or inbred lines. ...
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Fine mapping QTLs using Recombinant-Inbred HS and In-Vitro HS PowerPoint PPT Presentation
Fine mapping QTLs using Recombinant-Inbred HS and In-Vitro HS - Detecting a significant locus ... Mapping accuracy for significant loci. Mean mapping error = average distance between true QTL and the predicted locus ...
Detecting a significant locus ... Mapping accuracy for significant loci. Mean mapping error = average distance between true QTL and the predicted locus ...
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Whole genome QTL analysis using variable selection in complex linear mixed models PowerPoint PPT Presentation
Whole genome QTL analysis using variable selection in complex linear mixed models - Whole genome QTL analysis using variable selection in complex linear mixed models Julian Taylor Postdoctoral Fellow Food Futures National Research Flagship
Whole genome QTL analysis using variable selection in complex linear mixed models Julian Taylor Postdoctoral Fellow Food Futures National Research Flagship
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Welcome to the Quantitative Trait Loci QTL Tutorial PowerPoint PPT Presentation
Welcome to the Quantitative Trait Loci QTL Tutorial - This tutorial will describe how to navigate the section of Gramene that provides ... QTL are a statistical creation that identifies a particular region of the genome ...
This tutorial will describe how to navigate the section of Gramene that provides ... QTL are a statistical creation that identifies a particular region of the genome ...
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Use of breeding populations to detect and use QTL PowerPoint PPT Presentation
Use of breeding populations to detect and use QTL - Mutation Subpopulation structure / admixture Structure Analysis Given Structure Each individual has a probability of belonging to each subpopulation: ...
Mutation Subpopulation structure / admixture Structure Analysis Given Structure Each individual has a probability of belonging to each subpopulation: ...
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I Have the Power in QTL linkage: single and multilocus analysis PowerPoint PPT Presentation
I Have the Power in QTL linkage: single and multilocus analysis - Genetic Power Calculator is an online resource for carrying out basic power calculations ... Parameters in probability function calculator ...
Genetic Power Calculator is an online resource for carrying out basic power calculations ... Parameters in probability function calculator ...
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Alternatives to Fine Mapping Quantitative Trait Loci QTL in Barley Hordeum vulgare PowerPoint PPT Presentation
Alternatives to Fine Mapping Quantitative Trait Loci QTL in Barley Hordeum vulgare - A quantitative trait locus (QTL) is the location of a gene that affects a trait ... Ideogram of STAIRS for chromo some 3, indicating Col and Ler regions, line ...
A quantitative trait locus (QTL) is the location of a gene that affects a trait ... Ideogram of STAIRS for chromo some 3, indicating Col and Ler regions, line ...
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QTL for Kernel Composition Mapping Populations Derived from Illinois Long Term Selection Strains Oil PowerPoint PPT Presentation
QTL for Kernel Composition Mapping Populations Derived from Illinois Long Term Selection Strains Oil - QTL for Kernel Composition Mapping Populations Derived from Illinois Long Term Selection Strains Oil
QTL for Kernel Composition Mapping Populations Derived from Illinois Long Term Selection Strains Oil
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Confirmed linkage for QTLs affecting muscling in Texel sheep on chromosomes 2 and 18 PowerPoint PPT Presentation
Confirmed linkage for QTLs affecting muscling in Texel sheep on chromosomes 2 and 18 - ... QTLs affecting muscling in Texel sheep on chromosomes 2 and 18 ... Putative Callipyge and Carwell loci both increase muscling and are located on chromosome 18 ...
... QTLs affecting muscling in Texel sheep on chromosomes 2 and 18 ... Putative Callipyge and Carwell loci both increase muscling and are located on chromosome 18 ...
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the lgm qtl allele significantly reduced cew larval weight PowerPoint PPT Presentation
the lgm qtl allele significantly reduced cew larval weight - The LG-M QTL allele significantly reduced CEW larval weight gain in the absence ... The LG-H resistance allele seems to condition antibiosis towards TBW, which ...
The LG-M QTL allele significantly reduced CEW larval weight gain in the absence ... The LG-H resistance allele seems to condition antibiosis towards TBW, which ...
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QTL Detection in the UK Suffolk and Texel Sheep Sire Referencing Schemes PowerPoint PPT Presentation
QTL Detection in the UK Suffolk and Texel Sheep Sire Referencing Schemes - 2 Myostatin. 3 IGF1 & INFG. 4 Leptin. 5 Calpastatin. 6 Growth in Sheep & Cattle. 11 Growth Hormone 1 ... Myostatin. Results: Effects. Fat: 0.6mm. Muscle: 1.2mm ...
2 Myostatin. 3 IGF1 & INFG. 4 Leptin. 5 Calpastatin. 6 Growth in Sheep & Cattle. 11 Growth Hormone 1 ... Myostatin. Results: Effects. Fat: 0.6mm. Muscle: 1.2mm ...
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Mapping QTL in general pedigrees using the random model approach PowerPoint PPT Presentation
Mapping QTL in general pedigrees using the random model approach - Probability that gamete in i, inherited. from x is IBD to gamete in j, inherited ... Probability that gamete is IBD to. paternal (or maternal) allele of x ...
Probability that gamete in i, inherited. from x is IBD to gamete in j, inherited ... Probability that gamete is IBD to. paternal (or maternal) allele of x ...
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Mapping for Quantitative Trait Loci QTL Associated with Carotenoid and Tocopherol Variability in Mai PowerPoint PPT Presentation
Mapping for Quantitative Trait Loci QTL Associated with Carotenoid and Tocopherol Variability in Mai - usually it is a marker described by statistical association to ... Associated with reduced risk of cataract development and age related macular degeneration ...
usually it is a marker described by statistical association to ... Associated with reduced risk of cataract development and age related macular degeneration ...
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Use of Quantitative Trait Loci (QTL) in Dairy Sire Selection PowerPoint PPT Presentation
Use of Quantitative Trait Loci (QTL) in Dairy Sire Selection - ... traits using the merged set of Dairy Bull DNA Repository (DBDR) ... The most significant effects were located on Bos taurus autosome (BTA) 3, 6, 14 and 20. ...
... traits using the merged set of Dairy Bull DNA Repository (DBDR) ... The most significant effects were located on Bos taurus autosome (BTA) 3, 6, 14 and 20. ...
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Algorithms and Programs for Gene Expression QTL Analysis PowerPoint PPT Presentation
Algorithms and Programs for Gene Expression QTL Analysis - yg. Trait (z) Network effect ( ) eQTL effect (a) Expression effect (?) ... Explore statistical and computational methods to construct genetic effect networks ...
yg. Trait (z) Network effect ( ) eQTL effect (a) Expression effect (?) ... Explore statistical and computational methods to construct genetic effect networks ...
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Genome wide expression consequences of a disease resistance QTL are strongly influenced by the genetic background PowerPoint PPT Presentation
Genome wide expression consequences of a disease resistance QTL are strongly influenced by the genetic background - Genome wide expression consequences of a disease resistance ... Hassan Musa. Joel Mwakya. Daniel Mwanga. Jan Naessens. Joseph Nganga. Moises Ogugu. John Wambugu ...
Genome wide expression consequences of a disease resistance ... Hassan Musa. Joel Mwakya. Daniel Mwanga. Jan Naessens. Joseph Nganga. Moises Ogugu. John Wambugu ...
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Efficient Precision Mapping of QTL With Dense Marker Maps PowerPoint PPT Presentation
Efficient Precision Mapping of QTL With Dense Marker Maps - 'Haplotype-based' method: y = Xb Zh e. y vector of phenotypes. b vector of fixed effects (mean) ... Final generation: marker haplotypes sharing same alleles ...
'Haplotype-based' method: y = Xb Zh e. y vector of phenotypes. b vector of fixed effects (mean) ... Final generation: marker haplotypes sharing same alleles ...
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SNP/Tiling arrays for very high density marker based breeding and QTL candidate gene identification Justin Borevitz Ecology PowerPoint PPT Presentation
SNP/Tiling arrays for very high density marker based breeding and QTL candidate gene identification Justin Borevitz Ecology - SNP/Tiling arrays for very high density marker based breeding and QTL candidate gene identification Justin Borevitz Ecology & Evolution University of Chicago
SNP/Tiling arrays for very high density marker based breeding and QTL candidate gene identification Justin Borevitz Ecology & Evolution University of Chicago
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A Transgenic Approach to QTL analysis in a Trypanotolerant Mouse Model PowerPoint PPT Presentation
A Transgenic Approach to QTL analysis in a Trypanotolerant Mouse Model - This work was supported by the Wellcome Trust. Introduction ... SNP genotyping is underway to investigate a possible heterozygote effect on survival time. ...
This work was supported by the Wellcome Trust. Introduction ... SNP genotyping is underway to investigate a possible heterozygote effect on survival time. ...
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Identify the location of a particular gene, trait, QTL or marker and the grass species they have bee PowerPoint PPT Presentation
Identify the location of a particular gene, trait, QTL or marker and the grass species they have bee - Having too many clickable features may be problematic for some browsers. ... sanity check, features will not be clickable in order to prevent these problems. ...
Having too many clickable features may be problematic for some browsers. ... sanity check, features will not be clickable in order to prevent these problems. ...
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Figure S1. Pedigree of oil palm heterotic groups A (A) and B (B) individuals related to A PowerPoint PPT Presentation
Figure S1. Pedigree of oil palm heterotic groups A (A) and B (B) individuals related to A - B. A. C. Pedigree. QTL B_9@69. QTL B_15@117. Figure S5. Example of QTL segregation in oil palm pedigree. Additive effects on bunch number for pedigree term (A,D) and ...
B. A. C. Pedigree. QTL B_9@69. QTL B_15@117. Figure S5. Example of QTL segregation in oil palm pedigree. Additive effects on bunch number for pedigree term (A,D) and ...
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Detection%20of%20QTL%20in%20beef%20cattle PowerPoint PPT Presentation
Detection%20of%20QTL%20in%20beef%20cattle - Detection of QTL in beef cattle. Eduardo Casas. U.S. Meat Animal Research Center, ... Quantitative trait loci (QTL) on bovine chromosome 5. Identification of ...
Detection of QTL in beef cattle. Eduardo Casas. U.S. Meat Animal Research Center, ... Quantitative trait loci (QTL) on bovine chromosome 5. Identification of ...
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Markery asistovan PowerPoint PPT Presentation
Markery asistovan - Markery asistovan selekce p m markery snadn j vyu it marker je sou st QTL genotyp markeru v dy odpov d genotypu QTL halotanov gen ...
Markery asistovan selekce p m markery snadn j vyu it marker je sou st QTL genotyp markeru v dy odpov d genotypu QTL halotanov gen ...
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BACKWARD REGION GRANT FUND FIVE YEAR PERSPECTIVE PLAN PowerPoint PPT Presentation
BACKWARD REGION GRANT FUND FIVE YEAR PERSPECTIVE PLAN - Mahua - 50000 Qtl. Imli - 20000 Qtl. Gum (kullu) - 2500 Qtl. Many spots are there which are of tourists importance due to rich heritage culture. ...
Mahua - 50000 Qtl. Imli - 20000 Qtl. Gum (kullu) - 2500 Qtl. Many spots are there which are of tourists importance due to rich heritage culture. ...
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Advanced%20Algorithms%20and%20Models%20for%20Computational%20Biology%20--%20a%20machine%20learning%20approach PowerPoint PPT Presentation
Advanced%20Algorithms%20and%20Models%20for%20Computational%20Biology%20--%20a%20machine%20learning%20approach - Advanced Algorithms and Models for Computational Biology-- a machine learning approach Population Genetics: Quantitative Trait Locus (QTL) Mapping
Advanced Algorithms and Models for Computational Biology-- a machine learning approach Population Genetics: Quantitative Trait Locus (QTL) Mapping
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Professor Brian S. Yandell PowerPoint PPT Presentation
Professor Brian S. Yandell - time to flowering. QTLs in mouse model. diabetes model. multiple generations ... how do plants modify flowering time? intense collaboration. QTL gene mapping ...
time to flowering. QTLs in mouse model. diabetes model. multiple generations ... how do plants modify flowering time? intense collaboration. QTL gene mapping ...
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