465 Prosit PPTs View free & download

InterPro/prosite UCSC Genome Browser Exercise 3 PowerPoint PPT Presentation

InterPro/prosite UCSC Genome Browser Exercise 3 - InterPro/prosite UCSC Genome Browser Exercise 3 Turning information into knowledge The outcome of a sequencing project is masses of raw data The challenge is to turn ...

InterPro/prosite UCSC Genome Browser Exercise 3 Turning information into knowledge The outcome of a sequencing project is masses of raw data The challenge is to turn ...

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PsiBLAST, Prosite, UCSC Genome Browser Lecture 3 PowerPoint PPT Presentation

PsiBLAST, Prosite, UCSC Genome Browser Lecture 3 - The challenge is to turn these raw data into biological knowledge ... Profiles are used in prosite when the motif is relatively divergent, and is ...

The challenge is to turn these raw data into biological knowledge ... Profiles are used in prosite when the motif is relatively divergent, and is ...

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Motif discovery PowerPoint PPT Presentation

Motif discovery - Tutorial 5 Motif discovery Prosite - input Input motif a regular expression Database Filters Prosite - Output Input motif Location in the protein sequence protein ...

Tutorial 5 Motif discovery Prosite - input Input motif a regular expression Database Filters Prosite - Output Input motif Location in the protein sequence protein ...

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Sequence%20databases%20and%20retrieval%20systems PowerPoint PPT Presentation

Sequence%20databases%20and%20retrieval%20systems - High-quality annotations: Systematic control by a team of annotators. ... InterPro unifies PROSITE, PRINTS, Profile, ProDom, Pfam, SMART, and TIGRFam. InterPro ...

High-quality annotations: Systematic control by a team of annotators. ... InterPro unifies PROSITE, PRINTS, Profile, ProDom, Pfam, SMART, and TIGRFam. InterPro ...

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The Detrimental Impact of Chronic Renal Insufficiency PowerPoint PPT Presentation

The Detrimental Impact of Chronic Renal Insufficiency - PROSIT. 308. 12.0. SIRTAX. 1,012. 24.2 ... PROSIT. 0/154. 2/154. SORT-OUT II. NA. Risk of Stent Thrombosis ... PROSIT. REALITY. SIRTAX. TAXI. Study ommited ...

PROSIT. 308. 12.0. SIRTAX. 1,012. 24.2 ... PROSIT. 0/154. 2/154. SORT-OUT II. NA. Risk of Stent Thrombosis ... PROSIT. REALITY. SIRTAX. TAXI. Study ommited ...

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The Genome Access Course Multiple Sequence Alignments PowerPoint PPT Presentation

The Genome Access Course Multiple Sequence Alignments - Aligning two sequences according to the Smith-Waterman alignment is ... MACAW. BOXSHADE. PRETTYBOX. Databases Based on MSAs. PROSITE. FINGERPRINTS. BLOCKS ...

Aligning two sequences according to the Smith-Waterman alignment is ... MACAW. BOXSHADE. PRETTYBOX. Databases Based on MSAs. PROSITE. FINGERPRINTS. BLOCKS ...

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Ab initio motif finding PowerPoint PPT Presentation

Ab initio motif finding - Ab initio motif finding. Ryo Shimizu. Agenda. Background ... curate. Identification of DNA-binding residues. PROSITE motif pattern: CX(2 4)CX(11 13)HX(3 5)H ...

Ab initio motif finding. Ryo Shimizu. Agenda. Background ... curate. Identification of DNA-binding residues. PROSITE motif pattern: CX(2 4)CX(11 13)HX(3 5)H ...

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APAN e-Science Workshop e-Bio System for Bio-Knowledge Discovery PowerPoint PPT Presentation

APAN e-Science Workshop e-Bio System for Bio-Knowledge Discovery - New discoveries of biological knowledge are published in scientific journals ... motifs. Prosite, pfam, BLOCKS, InterPro. Keyword querying and motif detection ...

New discoveries of biological knowledge are published in scientific journals ... motifs. Prosite, pfam, BLOCKS, InterPro. Keyword querying and motif detection ...

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Mapping of Scientific Workflow within the e-Protein project to Distributed Resources PowerPoint PPT Presentation

Mapping of Scientific Workflow within the e-Protein project to Distributed Resources - Prosite-patterns - Secondary structure prediction ... Kieran Flemming, Oliver Jevons (kittens and crochet) Contact: http://www.lesc.ic.ac.uk ...

Prosite-patterns - Secondary structure prediction ... Kieran Flemming, Oliver Jevons (kittens and crochet) Contact: http://www.lesc.ic.ac.uk ...

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Public awareness campaign 1 2 % for better life PowerPoint PPT Presentation

Public awareness campaign 1 2 % for better life - to provide understandable information about the 1% assignation ... (Nenechajte sa prosit!) Forms: greenline instead of consultants in the region. Campaign 2003 ...

to provide understandable information about the 1% assignation ... (Nenechajte sa prosit!) Forms: greenline instead of consultants in the region. Campaign 2003 ...

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The Genome Access Course Protein Structure PowerPoint PPT Presentation

The Genome Access Course Protein Structure - High quality; nice graphics. Alignment of. Representative. Members. Description ... Pfam, SMART, ProDom, PRINTS, and Prosite domains. High quality annotation ...

High quality; nice graphics. Alignment of. Representative. Members. Description ... Pfam, SMART, ProDom, PRINTS, and Prosite domains. High quality annotation ...

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Functional annotation Part I PowerPoint PPT Presentation

Functional annotation Part I - Molecular function. Biological process. Cellular component ... Different methods for searching functional sites. HMMs, Prosite patterns, PSSMs ...

Molecular function. Biological process. Cellular component ... Different methods for searching functional sites. HMMs, Prosite patterns, PSSMs ...

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Database and programming languages PHP,Python,Perl,Java PowerPoint PPT Presentation

Database and programming languages PHP,Python,Perl,Java - term.name='rhodopsin-like receptor activity'and. term.acc='GO:0001584'; SQL Result ... 'rhodopsin-like receptor activity', 'PROSITE', 'PS00238 OPSIN' ...

term.name='rhodopsin-like receptor activity'and. term.acc='GO:0001584'; SQL Result ... 'rhodopsin-like receptor activity', 'PROSITE', 'PS00238 OPSIN' ...

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An introduction to biological databases PowerPoint PPT Presentation

An introduction to biological databases - PPDB, PRESAGE, PRINTS, ProDom, Prolysis, PROSITE, PROTOMAP, RatMAP, RDP, REBASE, RGP, SBASE, ... sequences generated by the high-throughput. sequencing centers ...

PPDB, PRESAGE, PRINTS, ProDom, Prolysis, PROSITE, PROTOMAP, RatMAP, RDP, REBASE, RGP, SBASE, ... sequences generated by the high-throughput. sequencing centers ...

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Identifying Sequence-Structure Patterns Tom Milledge1, Chengyong Yang1, Gaolin Zheng1, Xintao Wei1, Sawsan Khuri 2, and Giri Narasimhan1, 1Bioinformatics Research Group (BioRG), School of Computer Science, Florida International University, Miami, FL. - Immunoglobin/Major Histocompatability Complex Proteins. The original PROSITE ... Formate/glycerate dehydrogenases, SCOP Family C.2.1.4 ...

Immunoglobin/Major Histocompatability Complex Proteins. The original PROSITE ... Formate/glycerate dehydrogenases, SCOP Family C.2.1.4 ...

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The Internal Quality Control System at the Office of the Auditor General of Norway PowerPoint PPT Presentation

The Internal Quality Control System at the Office of the Auditor General of Norway - Common to all Quality Control at the OAG. QC is not part of day to day Quality Assurance ... The use of the support tool (Prosit) varies ...

Common to all Quality Control at the OAG. QC is not part of day to day Quality Assurance ... The use of the support tool (Prosit) varies ...

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Sales 2000 - 77% of business outside of home market, - Rapid progression due to organic ... Prosit, Cin-cin, Cheerio, Sant , Salud, Slainte, Na zdravi, Na zdrowie, Cheers ! ...

77% of business outside of home market, - Rapid progression due to organic ... Prosit, Cin-cin, Cheerio, Sant , Salud, Slainte, Na zdravi, Na zdrowie, Cheers ! ...

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Databases in Bioinformatics PowerPoint PPT Presentation

Databases in Bioinformatics - Low quality sequences generated by high -volume sequencing the 3' or 5' end of cDNAs ... www.expassy.org/prosite) and PRINTS (http://bioinf.man.ac.uk/dbbrowser/PRINTS ...

Low quality sequences generated by high -volume sequencing the 3' or 5' end of cDNAs ... www.expassy.org/prosite) and PRINTS (http://bioinf.man.ac.uk/dbbrowser/PRINTS ...

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LIS651 lecture 0 Gathering and showing data PowerPoint PPT Presentation

LIS651 lecture 0 Gathering and showing data - Course home page is at http://wotan.liu.edu/home/krichel/courses/lis651n07s ... print 'We ship when we get your check! br/ '; print 'Prosit! /div ...

Course home page is at http://wotan.liu.edu/home/krichel/courses/lis651n07s ... print 'We ship when we get your check! br/ '; print 'Prosit! /div ...

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LIS651 lecture 0 Gathering and showing data - Course home page is at http://wotan.liu.edu/home/krichel/courses/lis651n06s ... print 'We ship when we get your check! br/ '; print 'Prosit! /div ...

Course home page is at http://wotan.liu.edu/home/krichel/courses/lis651n06s ... print 'We ship when we get your check! br/ '; print 'Prosit! /div ...

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Protein World PowerPoint PPT Presentation

Protein World - At this moment more than 80 genomes have been sequenced and published, of all ... Domain-based clusterings: Prosite, Pfam, ProDom, Prints, Domo, Blocks ...

At this moment more than 80 genomes have been sequenced and published, of all ... Domain-based clusterings: Prosite, Pfam, ProDom, Prints, Domo, Blocks ...

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Comparison of Data Access and Integration Technologies in the Life Science Domain PowerPoint PPT Presentation

Comparison of Data Access and Integration Technologies in the Life Science Domain - Linking using in co-ordinated, secure manner full of open issues to be addressed ... Molecular Classifications (SCOP, CATH,...) Motif Libraries (PROSITE, Blocks, ...

Linking using in co-ordinated, secure manner full of open issues to be addressed ... Molecular Classifications (SCOP, CATH,...) Motif Libraries (PROSITE, Blocks, ...

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Efficient Discovery PowerPoint PPT Presentation

Efficient Discovery - It must be specify what kind of patterns should be searched for and how many ... patterns of the PROSIT types allowing for both ambiguous pattern position and ...

It must be specify what kind of patterns should be searched for and how many ... patterns of the PROSIT types allowing for both ambiguous pattern position and ...

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L-artiklu - Title: No Slide Title Author: Daniela Sciberras Last modified by: Schools_Test Created Date: 11/18/2002 4:43:54 PM Document presentation format: On-screen Show

Title: No Slide Title Author: Daniela Sciberras Last modified by: Schools_Test Created Date: 11/18/2002 4:43:54 PM Document presentation format: On-screen Show

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PROTEIN PATTERN DATABASES - protein pattern databases

protein pattern databases

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BLOCKS - BLOCKS http://www.blocks.fhcrc.org/ Multiply aligned ungapped segments corresponding to most highly conserved regions of proteins- represented in profile

BLOCKS http://www.blocks.fhcrc.org/ Multiply aligned ungapped segments corresponding to most highly conserved regions of proteins- represented in profile

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Dressing up Protein Sequences with Bioinformatics Data - Dressing up Protein Sequences with Bioinformatics Data

Dressing up Protein Sequences with Bioinformatics Data

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PROTEIN PATTERN DATABASES - ... models), can use two modes ls or fs, all domains should be matched with ls ... expressions, profiles, fingerprints, Hidden Markov Models and ProDom domains ...

... models), can use two modes ls or fs, all domains should be matched with ls ... expressions, profiles, fingerprints, Hidden Markov Models and ProDom domains ...

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BEPS POYIM - POYIM

POYIM

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NAR?? - Title: 1 Author: xy Last modified by: Lenovo User Created Date: 4/17/2006 9:03:07 AM Document presentation format: Company

Title: 1 Author: xy Last modified by: Lenovo User Created Date: 4/17/2006 9:03:07 AM Document presentation format: Company

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Welcome to the Protein Database Tutorial PowerPoint PPT Presentation

Welcome to the Protein Database Tutorial - Images shown may not be up to date, so results on your searches may be different, ... Cultivar (stock) from which the gene was sequenced. ...

Images shown may not be up to date, so results on your searches may be different, ... Cultivar (stock) from which the gene was sequenced. ...

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Identifying amino acid residues involved in protein-DNA interactions from sequence PowerPoint PPT Presentation

Identifying amino acid residues involved in protein-DNA interactions from sequence - ... Yan, Michael Terribilini, Feihong Wu, Robert L. Jernigan, Drena Dobbs and Vasant ... 4 Laurence H Baker Center for Bioinformatics and Biological Statistics, 5 ...

... Yan, Michael Terribilini, Feihong Wu, Robert L. Jernigan, Drena Dobbs and Vasant ... 4 Laurence H Baker Center for Bioinformatics and Biological Statistics, 5 ...

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- Title: PowerPoint Presentation Author: blatter Last modified by: marie-claude blatter Created Date: 1/3/2005 2:21:26 PM Document presentation format

Title: PowerPoint Presentation Author: blatter Last modified by: marie-claude blatter Created Date: 1/3/2005 2:21:26 PM Document presentation format

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Databases for Protein Sequences PowerPoint PPT Presentation

Databases for Protein Sequences - http://www.ebi.ac.uk/interpro/ http://www.ebi.ac.uk/interpro ... amyloid protein levels in the brain increase, leading to aggregation of the proteins. ...

http://www.ebi.ac.uk/interpro/ http://www.ebi.ac.uk/interpro ... amyloid protein levels in the brain increase, leading to aggregation of the proteins. ...

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Integration of Protein Family, Function, Structure PowerPoint PPT Presentation

Integration of Protein Family, Function, Structure - synonyms. iProClass Protein Report (II) Integrated added-value ... See protein synonyms and the source attribution. iProClass Text Search Result (VII) ...

synonyms. iProClass Protein Report (II) Integrated added-value ... See protein synonyms and the source attribution. iProClass Text Search Result (VII) ...

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Presentaci - Alineamiento de secuencias. B squeda de hom logos. Alineamientos m ltiples. Patrones y perfiles. Curso de verano de Bioinform tica de la UCM

Alineamiento de secuencias. B squeda de hom logos. Alineamientos m ltiples. Patrones y perfiles. Curso de verano de Bioinform tica de la UCM

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The Cell, Central Dogma and Human Genome Project PowerPoint PPT Presentation

The Cell, Central Dogma and Human Genome Project - The Cell, Central Dogma and. Human Genome Project. A Eukaryotic Cell ... (How Perl saved the Human Genome project?) Major Database and Data collection methods: ...

The Cell, Central Dogma and. Human Genome Project. A Eukaryotic Cell ... (How Perl saved the Human Genome project?) Major Database and Data collection methods: ...

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Guiding motif discovery by iterative pattern refinement PowerPoint PPT Presentation

Guiding motif discovery by iterative pattern refinement - Protein motifs are short patterns conserved in proteins. They are generally important for the function of a protein or the maintenance of ...

Protein motifs are short patterns conserved in proteins. They are generally important for the function of a protein or the maintenance of ...

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Identification of Protein Domains PowerPoint PPT Presentation

Identification of Protein Domains - Let's untrivialize by allowing for gaps: insertions and deletions. Start off with the PSSM HMM. ... insertions: Introduce new states Ij match insertions ...

Let's untrivialize by allowing for gaps: insertions and deletions. Start off with the PSSM HMM. ... insertions: Introduce new states Ij match insertions ...

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Welcome to the Protein Database Tutorial - This tutorial will describe how to navigate the section of Gramene that provides ... Cultivar (stock) from which the gene was sequenced. ...

This tutorial will describe how to navigate the section of Gramene that provides ... Cultivar (stock) from which the gene was sequenced. ...

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Bio-Trac 25 (Proteomics: Principles and Methods) PowerPoint PPT Presentation

Bio-Trac 25 (Proteomics: Principles and Methods) - Title: Protein Family Classification for Functional Genomics Author: wuc Last modified by: zh9 Created Date: 3/9/2001 10:06:29 PM Document presentation format

Title: Protein Family Classification for Functional Genomics Author: wuc Last modified by: zh9 Created Date: 3/9/2001 10:06:29 PM Document presentation format

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Matching Problems in Bioinformatics PowerPoint PPT Presentation

Matching Problems in Bioinformatics - Given a string P (pattern) and a long string T (text), find ... PRINTS (http://umber.sbs.man.ac.uk/dbbrowser/PRINTS/ ) is a database of protein fingerprints. ...

Given a string P (pattern) and a long string T (text), find ... PRINTS (http://umber.sbs.man.ac.uk/dbbrowser/PRINTS/ ) is a database of protein fingerprints. ...

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CSE182-L5:%20Position%20specific%20scoring%20matrices%20Regular%20Expression%20Matching%20Protein%20Domains PowerPoint PPT Presentation

CSE182-L5:%20Position%20specific%20scoring%20matrices%20Regular%20Expression%20Matching%20Protein%20Domains - Sometimes, homology (evolutionary similarity) exists at very low levels of ... types, which is variously known as a pattern, motif, signature or fingerprint. ...

Sometimes, homology (evolutionary similarity) exists at very low levels of ... types, which is variously known as a pattern, motif, signature or fingerprint. ...

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BIOINFORMATIK I UEBUNG 2 PowerPoint PPT Presentation

BIOINFORMATIK I UEBUNG 2 - Title: Slide 1 Author: Andreas Prokesch Last modified by: Hackl Hubert Created Date: 1/23/2004 7:41:20 AM Document presentation format: Bildschirmpr sentation (4:3)

Title: Slide 1 Author: Andreas Prokesch Last modified by: Hackl Hubert Created Date: 1/23/2004 7:41:20 AM Document presentation format: Bildschirmpr sentation (4:3)

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GENOME ANNOTATION AND FUNCTIONAL GENOMICS The protein sequence perspective - GENOME ANNOTATION AND FUNCTIONAL GENOMICS The protein sequence perspective

GENOME ANNOTATION AND FUNCTIONAL GENOMICS The protein sequence perspective

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Sequence Based Analysis Tutorial PowerPoint PPT Presentation

Sequence Based Analysis Tutorial - Scoring Matrices Based on Conserved Amino Acid Substitution ... Likelihood of One Amino Acid Mutated into Another Over Evolutionary Time ...

Scoring Matrices Based on Conserved Amino Acid Substitution ... Likelihood of One Amino Acid Mutated into Another Over Evolutionary Time ...

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Sequence analysis: Macromolecular motif recognition PowerPoint PPT Presentation

Sequence analysis: Macromolecular motif recognition - Sequence analysis: Macromolecular motif recognition Sylvia Nagl Sequence analysis: Macromolecular motif recognition Sylvia Nagl Amino acid primary sequence 2.

Sequence analysis: Macromolecular motif recognition Sylvia Nagl Sequence analysis: Macromolecular motif recognition Sylvia Nagl Amino acid primary sequence 2.

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Introduction to Structural Biology PowerPoint PPT Presentation

Introduction to Structural Biology - Faculty of Life Science, TAU. Tel: 03-640 6840. E-mail: suezadva@tauex.tau.ac.il. Bioinfo. ... residues forbidden at the position. ...

Faculty of Life Science, TAU. Tel: 03-640 6840. E-mail: suezadva@tauex.tau.ac.il. Bioinfo. ... residues forbidden at the position. ...

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Computational Analysis of Protein-DNA Interactions PowerPoint PPT Presentation

Computational Analysis of Protein-DNA Interactions - Identifying amino acid residues involved in protein-DNA interactions from sequence ... Identification of Helix-Turn-Helix (HTH) DNA-binding motifs. 14. HTH Motifs ...

Identifying amino acid residues involved in protein-DNA interactions from sequence ... Identification of Helix-Turn-Helix (HTH) DNA-binding motifs. 14. HTH Motifs ...

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GENOME%20ANNOTATION%20AND%20FUNCTIONAL%20GENOMICS%20The%20protein%20sequence%20perspective PowerPoint PPT Presentation

GENOME%20ANNOTATION%20AND%20FUNCTIONAL%20GENOMICS%20The%20protein%20sequence%20perspective - GENOME ANNOTATION AND FUNCTIONAL GENOMICS The protein sequence perspective

GENOME ANNOTATION AND FUNCTIONAL GENOMICS The protein sequence perspective

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DNA?RNA - Title: Author: Last modified by: Created Date: 6/27/2005 6:07:49 AM Document presentation format

Title: Author: Last modified by: Created Date: 6/27/2005 6:07:49 AM Document presentation format

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A. Auchincloss PowerPoint PPT Presentation

A. Auchincloss - UniProtKB/Swiss-Prot and ExPASy: Protein sequence databases and proteomics tools developed at the Swiss Institute of Bioinformatics Andrea Auchincloss (andrea ...

UniProtKB/Swiss-Prot and ExPASy: Protein sequence databases and proteomics tools developed at the Swiss Institute of Bioinformatics Andrea Auchincloss (andrea ...

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MSD motif www.ebi.ac.uk/msd-srv/msdmotif PowerPoint PPT Presentation

MSD motif www.ebi.ac.uk/msd-srv/msdmotif - 'Group' menu item contains a list of presented in a PDB entry sites ... 3D and sequence multiple alignment. Hit list and statistics normalization by SCOP,CATH ...

'Group' menu item contains a list of presented in a PDB entry sites ... 3D and sequence multiple alignment. Hit list and statistics normalization by SCOP,CATH ...

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Biological Networks - Biological Networks

Biological Networks

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The Poor Beginners PowerPoint PPT Presentation

The Poor Beginners - a text editor (Notepad or better) public databases of genomic sequences ... Your phylogeny cannot be better than your alignment. Gaps are no data. ...

a text editor (Notepad or better) public databases of genomic sequences ... Your phylogeny cannot be better than your alignment. Gaps are no data. ...

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GENOME%20ANNOTATION%20AND%20FUNCTIONAL%20GENOMICS%20The%20protein%20sequence%20perspective - Availability of good, well annotated protein sequence and pattern databases ... Protein sequence can come from gene predictions, literature or peptide sequencing ...

Availability of good, well annotated protein sequence and pattern databases ... Protein sequence can come from gene predictions, literature or peptide sequencing ...

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