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Title: HMM Author: Zhaoyu Last modified by: winterr99 Created Date: 3/3/2005 4:54:54 AM Document presentation format: (4:3) Company

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HMM - Part 2 The EM algorithm Continuous density HMM

1. Hmm What season is it here? Winter or Summer? How do you know? 2. If you were a migrating bird Where might you want to be on this image??

... Likelihood (ML) or Maximum A Posteriori (MAP) criteria ... Each state has a state-dependent output probability ... Maximum a Posteriori (MAP) ...

Simple optimization algorithms for likelihood functions rely on the ... [Minka 1998] 4. objective function. current guess. Form an Initial Guess of =(A,B, ...

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Application des HMMs la reconnaissance vocale Adapt de Yannis Korilis, Christian St-Jean, Dave DeBarr, Bob Carpenter, Jennifer Chu-Carroll et plusieurs autres

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Application des HMMs la reconnaissance vocale Adapt de Yannis Korilis, Christian St-Jean, Dave DeBarr, Bob Carpenter, Jennifer Chu-Carroll et plusieurs autres

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1. HMM Tagging. Choose the best tag sequence for a sentence. where. 2. Derivation. B ayes Law. 3. Chain rule of probability: Assume: 4. Bigram Tagger ...

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Parameter Estimation For HMM Background Readings: Chapter 3.3 in the book, Biological Sequence Analysis, Durbin et al., 2001.

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HMM nutricare Products

State-emission HMM (Moore machine) ... Learn to use Carmel (a WFST package) Use Carmel as an HMM Viterbi decoder for a trigram POS tagger. ...

A second order HMM with K states is equivalent to a first ... We will divide alignment score by the random score, and take logarithms. Let. P(xi, yj) (1 2 ...

Decoding: given a model and an output sequence, what is the most likely state sequence through the model that generated the output? A solution to this problem gives ...

The Hidden Markov Model Toolkit (HTK) is a portable toolkit for building and ... Due to this, we need to jerry-rig our data to the HTK parameterized data file format. ...

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HMMS Functional Users Conference

Gene Finding and HMMs. Lecture 1 - Introduction. Lecture 2 - Hashing and BLAST ... Lecture 7 - Gene finding and Hidden Markov Models ...

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HMM for multiple sequences. Pair HMM. HMM for pairwise sequence alignment, which ... gnat - - A A A C. goat A G - - - C. 1 2 . . . 3 (a) Multiple alignment: ...

Media and Symbols: The Forms of Expression, Communication and Education. 1974 ... The Internet is also creating new forms of knowledge, namely personal knowledge ...

... Tying Model Tying State Tying Mixture Tying Beam Search Although the Viterbi Algorithm has linear complexity ... Extraction Recognition n-gram ft ...

Gene finding with GeneMark.HMM (Lukashin & Borodovsky, 1997) CS 466 Saurabh Sinha

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Using HMMs: An Example. An HMM. P(q2=Happy) = ? P(q2=Happy) = ? (by ... P(o1=Laugh, o2=Frown) = ? (Evaluation Problem) P(o1=Laugh, o2=Frown) = ? P(q1=S | o1=F) ...

Finding the probability that a letter is in a CpG island via the algorithm for ... If the sample set is too small, we may get a biased result. ...

The major difference from the forward algorithm: Maximization instead of sum ... xt(i,j) is the probability of being in state Si at time t, and Sj at time t 1 ...

HMM-BASED. PATTERN DETECTION. Image Processing and Reconstruction. Winter 2002. Outline ... Application: Pattern Detection. SNR=-5. SNR=10. Simulations ...

SLAMming the. Human and mouse. genomes. Marina Alexandersson. Simon Cawley. Lior Pachter ... http://pipeline.lbl.gov/ http://bio.math.berkeley.edu/slam/mouse ...

... large pot' in the training corpus, and pick the most common tag ... Suppose in our training corpus, 'fish' appears 8 times as a noun and 4 times as a verb ' ...

1. S. Salzberg CMSC 828N. Three classic HMM problems ... A solution to this problem gives us a way to match up an observed sequence and ... Three classic HMM problems ...

A Tutorial on Hidden Markov Models and Selected Applications in ... Casino Coin Properties of an HMM First-order Markov process qt only depends on qt-1 ...

Hidden Markov Models (HMMs) Steven Salzberg. CMSC 828N, Univ. of ... Real time continuous speech recognition (HMMs are the basis for all the ... classic ...

Dell PowerEdge 2650. Win 2000 Srvr or Redhat Linux Adv Srvr. 2 3.0GHz 1MB cache CPUs ... Dell PowerEdge 1750. Win 2000 Server. 2 3.0GHz 1MB cache CPUs. 2GB RAM ...

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Waste Profile. Waste Manifest. Create/Request Containers. Manifest. TSDF. Bill of Lading. Waste Label Layout Editor demonstration ...

Speech Recognition. Vehicle Trajectory Projection. Gesture Learning for Human-Robot Interface ... Visible: A. G. T. C. HMM for CpG Islands. The Three Problems ...

An important task in analyzing DNA sequences is recognizing the genes which code ... Initialization: fM(0,0)=1, fX(0,0)= fY(0,0)=0 (we start from M, but we could ...

A probabilistic model which deals with sequences of symbols. ... Instead of going over all possible paths (lots of computation...) dynamic programming. ...

HMMs could be compared to a kind of dynamic statistical profile ... The probability of a given sequence is obtained by the sum of loge (transition probabilities) ...

Lecture 8: Hidden Markov Models (HMMs) Prepared by Michael Gutkin Shlomi Haba Originally presented at Yaakov Stein s DSPCSP Seminar, spring 2002

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Nintendo Co.'s ... now. works as a videophone ... which makes ... Nintendo has sold more. than 10 million Game Boy. Motivation. Variable Length Passages ...

2004 HMMS Users' Conference. HMMS Program Management Office ... Eglin, Cherry Point, Hanscom, Tinker, Brooks, Marshall Data Conversion. Implementation Issues ...

PFAM:Protein families database of alignments and HMMs. HMMpro at www.netid.com,(Baldi, Chauvin and Mittal-Henkle) HMMER at hmmer.wustl. ... dry dryish damp soggy ...

We use si and wk to refer to what is in an HMM structure. ... data into two sets: create the voc from set1, and estimate P( unk |t) from set2. ...

HMM vs. Maximum Entropy for SU Detection Yang Liu 04/27/2004 Outline SU Detection Problem Two Modeling Approaches Experimental Results Conclusions & Future Work SU ...

Wide variation in pronunciation of English in the British Isles. Perceived as problem for speech technologies. No systematic study published to date ...