Cluster

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Cluster TreeView

• http//rana.lbl.gov/EisenSoftware.htm

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CLUSTER
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Loading Data
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GWEIGHT AND GORDER
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Dataset
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Adjusting Data
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Filtering Data
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Ordering of nodes
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Output files

• .cdt file clustered data table
• (original data with the rows and columns
  reordered based on the clustering result)
• .gtr gene tree
• .atr array tree

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TreeView

• The .gtr and/or .atr files are automatically read
  in TreeView when you open the corresponding .cdt
  file.

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PCA

• Jobname_svv.txt principal components
• Jobname_svu.txt loadings of each gene on the
  principal components