42 Gsea PPTs View free & download

Gene Set Enrichment Analysis (GSEA) PowerPoint PPT Presentation

Gene Set Enrichment Analysis (GSEA) - Gene Set Enrichment Analysis (GSEA) * * * * * * * * * * * * * * * * Gene expression analysis (Microarray & RNA-seq) Gene expression matrix Condition B treated ...

Gene Set Enrichment Analysis (GSEA) * * * * * * * * * * * * * * * * Gene expression analysis (Microarray & RNA-seq) Gene expression matrix Condition B treated ...

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Agenda - Agenda Biological databases related to microarray Gene Ontology KEGG Biocarta Reactome MSigDB Pathway enrichment analysis GSEA GSA Ingenuity Pathway Analysis (IPA)

Agenda Biological databases related to microarray Gene Ontology KEGG Biocarta Reactome MSigDB Pathway enrichment analysis GSEA GSA Ingenuity Pathway Analysis (IPA)

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NORM: Radiation Surveys PowerPoint PPT Presentation

NORM: Radiation Surveys - NORM: Radiation Surveys (an Attempt for Source Inventory) Gert Jonkers Engineering & Analytical - GSEA/4 Problem Solving (Shell E&P Ionising Radiation/NORM HSE ...

NORM: Radiation Surveys (an Attempt for Source Inventory) Gert Jonkers Engineering & Analytical - GSEA/4 Problem Solving (Shell E&P Ionising Radiation/NORM HSE ...

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Gene Set Enrichment Analysis PowerPoint PPT Presentation

Gene Set Enrichment Analysis - Significance threshold after correcting for multiple ... ES = max deviation from 0 ... http://www.broad.mit.edu/cancer/software/gsea/wiki/index.php/Data_formats ...

Significance threshold after correcting for multiple ... ES = max deviation from 0 ... http://www.broad.mit.edu/cancer/software/gsea/wiki/index.php/Data_formats ...

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NORM Regulatory Scene PowerPoint PPT Presentation

NORM Regulatory Scene - NORM Regulatory Scene (an international perspective) Gert Jonkers Engineering & Analytical - GSEA/4 Problem Solving (Shell E&P Ionising Radiation/NORM HSE ...

NORM Regulatory Scene (an international perspective) Gert Jonkers Engineering & Analytical - GSEA/4 Problem Solving (Shell E&P Ionising Radiation/NORM HSE ...

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NORM: Measurement PowerPoint PPT Presentation

NORM: Measurement - Gert.Jonkers@Shell.com. G. Jonkers, GSEA/4 at SRTCA. P.O. Box 38000, 1030 BN ... add a polonium (208Po) isotopic spike. Plate out polonium on a clean Ag-plate ...

Gert.Jonkers@Shell.com. G. Jonkers, GSEA/4 at SRTCA. P.O. Box 38000, 1030 BN ... add a polonium (208Po) isotopic spike. Plate out polonium on a clean Ag-plate ...

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NORM: Radiation Surveys - Engineering & Analytical - GSEA/4 'Problem Solving' (Shell E&P Ionising Radiation/NORM HSE ... External g(b)-Radiation Monitor (ex-proof, surface/assesment) ...

Engineering & Analytical - GSEA/4 'Problem Solving' (Shell E&P Ionising Radiation/NORM HSE ... External g(b)-Radiation Monitor (ex-proof, surface/assesment) ...

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E - G. Jonkers, GSEA/4 at SRTCA. P.O. Box 38000, 1030 BN Amsterdam. Cosmogenic NOR's. induced by interaction between particle radiation' and elements in the outer ...

G. Jonkers, GSEA/4 at SRTCA. P.O. Box 38000, 1030 BN Amsterdam. Cosmogenic NOR's. induced by interaction between particle radiation' and elements in the outer ...

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NORM Management System PowerPoint PPT Presentation

NORM Management System - Engineering & Analytical - GSEA/4 'Problem Solving' ... of workplace, appropriate personal dosimetry, assessment of results and data ...

Engineering & Analytical - GSEA/4 'Problem Solving' ... of workplace, appropriate personal dosimetry, assessment of results and data ...

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1. MSigDB Query Tool website_scripts PowerPoint PPT Presentation

1. MSigDB Query Tool website_scripts - 1. Create a relational database to store core MSigDB content. 2. Create web pages & scripts to upload single/batch gene set submissions ...

1. Create a relational database to store core MSigDB content. 2. Create web pages & scripts to upload single/batch gene set submissions ...

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Gene%20expression%20studies%20of%20cancer:%20gene%20transcription%20signatures PowerPoint PPT Presentation

Gene%20expression%20studies%20of%20cancer:%20gene%20transcription%20signatures - Gene expression studies of cancer: gene transcription signatures

Gene expression studies of cancer: gene transcription signatures

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A Proteomics and Transcriptomics Approach to Identify Leukemia Stem Cell (LSC) Markers - A Proteomics and Transcriptomics Approach to Identify Leukemia Stem Cell (LSC) Markers

A Proteomics and Transcriptomics Approach to Identify Leukemia Stem Cell (LSC) Markers

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Pathway Analysis PowerPoint PPT Presentation

Pathway Analysis - Pathway Analysis Goals Characterize biological meaning of joint changes in gene expression Organize expression (or other) changes into meaningful chunks (themes ...

Pathway Analysis Goals Characterize biological meaning of joint changes in gene expression Organize expression (or other) changes into meaningful chunks (themes ...

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Motif Discovery: Algorithm and Application PowerPoint PPT Presentation

Motif Discovery: Algorithm and Application - Objective: Motif discovery and use for deriving biological information ... Genome wide functional analysis using motif to find biological pattern ...

Objective: Motif discovery and use for deriving biological information ... Genome wide functional analysis using motif to find biological pattern ...

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Microarray%20Data%20Analysis%20-%20A%20Brief%20Overview PowerPoint PPT Presentation

Microarray%20Data%20Analysis%20-%20A%20Brief%20Overview - Affymetrix microarray preprocessing and quality assessment. Differential expression ... Affymetrix Microarray Preprocessing and Quality Assessment. Affymetrix ...

Affymetrix microarray preprocessing and quality assessment. Differential expression ... Affymetrix Microarray Preprocessing and Quality Assessment. Affymetrix ...

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Fr - ... that best separates (discriminates) two classes of objects. ... discriminates well between the two groups. Blue points tend to have smaller L values ...

... that best separates (discriminates) two classes of objects. ... discriminates well between the two groups. Blue points tend to have smaller L values ...

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Biological Pathway Workshop PowerPoint PPT Presentation

Biological Pathway Workshop - Feed your pathway analysis algorithms. Create pathway visualizations. Researchers ... Cytoscape plugin. Search and open WikiPathways pathways directly from Cytoscape. ...

Feed your pathway analysis algorithms. Create pathway visualizations. Researchers ... Cytoscape plugin. Search and open WikiPathways pathways directly from Cytoscape. ...

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Gene Expression and Cancer PowerPoint PPT Presentation

Gene Expression and Cancer - Create KrasLA mouse model: Mice with sporadically activated Kras2 through ... Mice develop lung adenoma ... Mouse tumor from KrasLA and NNK model were not ...

Create KrasLA mouse model: Mice with sporadically activated Kras2 through ... Mice develop lung adenoma ... Mouse tumor from KrasLA and NNK model were not ...

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Appoquinimink High School PowerPoint PPT Presentation

Appoquinimink High School - Our advanced placement courses follow the curriculum designated by college board and is ... Marketing Management Computer Science Family ...

Our advanced placement courses follow the curriculum designated by college board and is ... Marketing Management Computer Science Family ...

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Canadian Bioinformatics Workshops PowerPoint PPT Presentation

Canadian Bioinformatics Workshops - Canadian Bioinformatics Workshops www.bioinformatics.ca

Canadian Bioinformatics Workshops www.bioinformatics.ca

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Integrated%20transcriptional%20profiling%20and%20linkage%20analysis%20for%20mapping%20disease%20genes%20and%20regulatory%20gene%20networks%20analysis - Integrated transcriptional profiling and linkage analysis ... Integrating genome-wide eQTL data to identify gene association networks ... Chr 15 qRT-PCR ...

Integrated transcriptional profiling and linkage analysis ... Integrating genome-wide eQTL data to identify gene association networks ... Chr 15 qRT-PCR ...

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SMD Data Analysis Tutorial PowerPoint PPT Presentation

SMD Data Analysis Tutorial - Each spot will be individually assessed as specified, prior to any ... to renormalizing each array, using the spots that pass the spot filter criteria. ...

Each spot will be individually assessed as specified, prior to any ... to renormalizing each array, using the spots that pass the spot filter criteria. ...

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Graduado Superior en Enxeera Ambiental PowerPoint PPT Presentation

Graduado Superior en Enxeera Ambiental - ... 563100 Ext. 16703. Fax: 981 547140. Correo electr nico: enxamb@usc.es. Web: http://www.usc.es/enxamb. Asociaci n Galega Enxe eiros Ambientais: (AGAEA, Ext. 16781) ...

... 563100 Ext. 16703. Fax: 981 547140. Correo electr nico: enxamb@usc.es. Web: http://www.usc.es/enxamb. Asociaci n Galega Enxe eiros Ambientais: (AGAEA, Ext. 16781) ...

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Rational Drug Design Soma Mandal , Mee'nal Moudgil , Sanat K. Mandal PowerPoint PPT Presentation

Rational Drug Design Soma Mandal , Mee'nal Moudgil , Sanat K. Mandal - Rational Drug Design Soma Mandal , Mee'nal Moudgil , Sanat K. Mandal Introduction Drug: Compounds used for the prevention and treatment of diseases like cancer, etc ...

Rational Drug Design Soma Mandal , Mee'nal Moudgil , Sanat K. Mandal Introduction Drug: Compounds used for the prevention and treatment of diseases like cancer, etc ...

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NORM Final Disposal Options PowerPoint PPT Presentation

NORM Final Disposal Options - Title: PowerPoint Presentation Author: Registered User Last modified by: muc0671 Created Date: 2/7/2005 3:35:58 PM Document presentation format: On-screen Show

Title: PowerPoint Presentation Author: Registered User Last modified by: muc0671 Created Date: 2/7/2005 3:35:58 PM Document presentation format: On-screen Show

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Financing of IF Action Matrix: PowerPoint PPT Presentation

Financing of IF Action Matrix: - ... response to the DTIS and Action Matrix, articulating principals for a localised ... systems in line with the localised Vientiane Declaration on Aid Effectiveness ...

... response to the DTIS and Action Matrix, articulating principals for a localised ... systems in line with the localised Vientiane Declaration on Aid Effectiveness ...

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A Discussion of False Discovery Rate and the Identification of Differentially Expressed Gene Categor PowerPoint PPT Presentation

A Discussion of False Discovery Rate and the Identification of Differentially Expressed Gene Categor - A Discussion of False Discovery Rate and the ... Myostatin Knockout Mice vs. Wild Type. Belgian Blue. cattle have a. mutation in the. myostatin gene. ...

A Discussion of False Discovery Rate and the ... Myostatin Knockout Mice vs. Wild Type. Belgian Blue. cattle have a. mutation in the. myostatin gene. ...

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Canadian Bioinformatics Workshops - Canadian Bioinformatics Workshops www.bioinformatics.ca

Canadian Bioinformatics Workshops www.bioinformatics.ca

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Bioinformatics Applications of Machine Learning PowerPoint PPT Presentation

Bioinformatics Applications of Machine Learning - Some bioinformatics applications of the machine learning methods covered in the ... Smith-Waterman local alignment (includes only best-matching high-scoring regions) ...

Some bioinformatics applications of the machine learning methods covered in the ... Smith-Waterman local alignment (includes only best-matching high-scoring regions) ...

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Genomics to health PowerPoint PPT Presentation

Genomics to health - Genomics to health. Identify genes and pathways with a role in health and disease, ... Mootha VK et al Nat Genet. 2003; 34:267-73 ...

Genomics to health. Identify genes and pathways with a role in health and disease, ... Mootha VK et al Nat Genet. 2003; 34:267-73 ...

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Agenda - To systematically structuring and managing the knowledge? ... Alzheimer's disease, Huntington's disease, Prion disease.... 2. Enrichment analysis ...

To systematically structuring and managing the knowledge? ... Alzheimer's disease, Huntington's disease, Prion disease.... 2. Enrichment analysis ...

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MetaCore data analysis suite and functional analysis PowerPoint PPT Presentation

MetaCore data analysis suite and functional analysis - Custom list of targets, IDs 'Most important' genes - Highly connected. TFs, receptors, etc. ... Protein synthesis. Metabolic ligands. DNA. RNA. Protein ...

Custom list of targets, IDs 'Most important' genes - Highly connected. TFs, receptors, etc. ... Protein synthesis. Metabolic ligands. DNA. RNA. Protein ...

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SMD Data Analysis Tutorial - Using a genelist limits the data analyzed to a subset of genes ... Many data are removed, since only those that were very intense in the yellow ...

Using a genelist limits the data analyzed to a subset of genes ... Many data are removed, since only those that were very intense in the yellow ...

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i2b2 HUNTINGTONS DISEASE Microarray Array Analysis of HD PowerPoint PPT Presentation

i2b2 HUNTINGTONS DISEASE Microarray Array Analysis of HD - i2b2 HUNTINGTON'S DISEASE. Microarray Array Analysis of HD ... Huntington's disease (HD) is a dominant neurodegenerative disorder caused by ...

i2b2 HUNTINGTON'S DISEASE. Microarray Array Analysis of HD ... Huntington's disease (HD) is a dominant neurodegenerative disorder caused by ...

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Using Statistical Methods to Obtain a List of Differentially Expressed Genes PowerPoint PPT Presentation

Using Statistical Methods to Obtain a List of Differentially Expressed Genes - Wild-type vs. Myostatin Knockout Mice. Belgian Blue. cattle have a. mutation in the. myostatin gene. Affymetrix GeneChips on 5 Mice per Genotype. WT. WT. WT. M. M ...

Wild-type vs. Myostatin Knockout Mice. Belgian Blue. cattle have a. mutation in the. myostatin gene. Affymetrix GeneChips on 5 Mice per Genotype. WT. WT. WT. M. M ...

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Introduction to Steady State Metabolic Modeling PowerPoint PPT Presentation

Introduction to Steady State Metabolic Modeling - The conversion of glucose to glucose 6-phosphate always follows this stoichiometry : ... We can denote the stoichiometry of a reaction by a vector of coefficients ...

The conversion of glucose to glucose 6-phosphate always follows this stoichiometry : ... We can denote the stoichiometry of a reaction by a vector of coefficients ...

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Department of English Graduate Studies New Graduate Student Orientation PowerPoint PPT Presentation

Department of English Graduate Studies New Graduate Student Orientation - The ASU Academic Catalog is available online -- http://www.asu.edu/catalog ... they will be withdrawn by the Graduate College and will need to reapply. ...

The ASU Academic Catalog is available online -- http://www.asu.edu/catalog ... they will be withdrawn by the Graduate College and will need to reapply. ...

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NORM Management System - ... appropriate personal dosimetry, assessment of results and data of occupational radiation control ad 1) ... Quantified Risk Assessment Levels (QRA) ...

... appropriate personal dosimetry, assessment of results and data of occupational radiation control ad 1) ... Quantified Risk Assessment Levels (QRA) ...

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Style D 42 by 48 - RNA concentration and 260/ 280 ratio were determined using the NanoDrop ... Annealing, Selection, Extension, and Ligation) assay to quantify mRNA expression ...

RNA concentration and 260/ 280 ratio were determined using the NanoDrop ... Annealing, Selection, Extension, and Ligation) assay to quantify mRNA expression ...

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Nada Lavrac - DNA Microarray Data Analysis with SD. RSD approach to Descriptive Analysis ... its procedure for repetitive subgroup generation, via its weighted covering algo. ...

DNA Microarray Data Analysis with SD. RSD approach to Descriptive Analysis ... its procedure for repetitive subgroup generation, via its weighted covering algo. ...

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NORM Final Disposal Options - ... low-permeability cover material, gravel drainage layers and a topsoil layer. ... X-Ray Photograph (Chest) 100. Exempt level (WORK ACTIVITY EU, ICRP-2005) 300 ...

... low-permeability cover material, gravel drainage layers and a topsoil layer. ... X-Ray Photograph (Chest) 100. Exempt level (WORK ACTIVITY EU, ICRP-2005) 300 ...

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EMERALD Ontology Efforts PowerPoint PPT Presentation

EMERALD Ontology Efforts - OBI has the grand scope of enabling the modelling of any biomedical ... Meeting with OBI consortium and NTO working group member in January in Vancouver, ...

OBI has the grand scope of enabling the modelling of any biomedical ... Meeting with OBI consortium and NTO working group member in January in Vancouver, ...

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Gsea PowerPoint PPT Presentations