Signal Processing Problems in Genomics - PowerPoint PPT Presentation

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Signal Processing Problems in Genomics

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Title: Signal Processing Problems in Genomics


1
Signal Processing Problems in Genomics
  • Mohammad Al Bataineh
  • Illinois Institute of Technology
  • Chicago, IL

2
  • Why is genomics interesting for the
  • signal processing person?
  • Because there are sequences there!
  • OK, what sort of sequences?
  • Sequences from an alphabet of size four
  • ATTCGAAGATTTCAACGGGAAAADNA
  • 2. Sequences from an alphabet of size twenty
  • AACWYDEFGHIKLMNPQRSTVAPPQR Protein

3
Size-4 alphabet A, C, T, G bases (also called
or nucleotides) DNA sequences (genomes) are made
of these. Genes are parts of DNA, and are
4-letter sequences. Adenine
Thymine Cytosine Guanine
or Uracil (in RNA) DNA
deoxyribonucleic acid RNAribonucleic acid
4
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