Powerpoint template for scientific posters (Swarthmore College)

1 / 1
About This Presentation
Title:

Powerpoint template for scientific posters (Swarthmore College)

Description:

Lakeshore ecotype: fast growth, early maturation, short lifespan, found at low elevations ... Ecotype refers to the habitat and snake phenotype. ... – PowerPoint PPT presentation

Number of Views:136
Avg rating:3.0/5.0
Slides: 2
Provided by: ColinPur9

less

Transcript and Presenter's Notes

Title: Powerpoint template for scientific posters (Swarthmore College)


1
Population genetics in western garter
snakes Courtney Wolken¹, Megan Manes², Tonia
Schwartz², Anne Bronikowski² ¹Newton High
School, Newton, IA ²Department of Ecology,
Evolution, and Organismal Biology Iowa State
University, Ames, IA
  • Results
  • A total of 88 samples were successfully
    genotyped. (see Table 1)
  • One locus was dropped from analysis because it
    was out of Hardy Weinberg equilibrium in all four
    populations.
  • In comparing levels of genetic diversity, Stones
    (ST) had the lowest heterozygosity and fewest
    alleles.
  • Fst values were significantly different among
    many locations. Stones had the most genetic
    divergence. (Table2)
  • Questions
  • Previous research has identified morphological
    and physiological differences between the
    ecotypes (Lakeshore versus Meadow), based on
    common garden experiments. This variation has
    both a genetic and environmental basis. We
    address the following questions as the first step
    to understanding the genetic basis for these
    differences.
  • Do the populations vary in their amount of
    genetic diversity?
  • 2. Are the populations genetically different?
  • Conclusions
  • We found significant genetic structure among the
    four populations.
  • This structure was significant within the lake as
    well as between Lake and Meadow locations.
  • The degree of structure was similar to the
    previous study on other locations around Eagle
    Lake.
  • Of the four populations, Stones is the most
    genetically distinct and also has the least
    genetic diversity.
  • Future Directions
  • Extend the study to include four additional
    locations.
  • Determine if multiple paternity is present in
    garter snakes, and if so, to what extent.
  • Determine if the degree of multiple paternity in
    the studied populations of garter snakes is
    strongly linked to the life history traits
    defined by the differing ecotypes.

Introduction Eagle Lake, California provides
habitats for two different ecotypes of
terrestrial Gartner snake, Thamnophis elegans.
Based on location they have evolved differing
life history traits. Lakeshore ecotype fast
growth, early maturation, short lifespan, found
at low elevations Meadow ecotype slow growth,
late maturation, long lifespan, found at higher
elevations.
  • Methods
  • DNA was isolated from blood samples collected at
    four separate locations.
  • Samples were Nanodropped to ensure proper
    concentrations of DNA.
  • PCR reactions were run using eight different
    microsatellite loci with fluorescent-labels
    (neutral genetic markers).
  • Gel electrophoresis was used to confirm a
    successful PCR reaction.
  • Genotyping was performed by Iowa State University
    DNA facility and scored using Genemapper.
  • Population parameters were calculated using
    Arlequin, Genepop, Genalex, and Structure.
  • In testing each locus for Hardy Weinberg
    equilibrium, locus TelCa3 was dropped from the
    project.

Table 2 Pairwise Fst values indicates P-value
lt 0.01 indicates P-value lt 0.001
ML
SM
  • Literature cited
  • Manier, M.K. and Arnold S.J. 2006 Ecological
    correlates of population genetic structure a
    comparative approach using a vertebrate
    metacommunity.. Proc. R. Soc. B
  • Uller, T. and Olsson M. 2008 Multiple paternity
    in reptiles patterns and processes. Molecular
    Ecology 17.
  • Bronikowski, A. and Arnold S. 1999 The
    evolutionary ecology of life-history variation in
    the garter snake Thamnophis elegans. Ecology 80.
  • Using Bayesian statistics, the program Structure
    was able to group the individuals into genetic
    populations (Fig. 2).

GAL
ST
Fig. 2. Graphical representation from
Structure. SM ST ML GA
Table 1. Sites, codes, ecotypes, sample sizes,
and measures of genetic diversity for the studied
locations. Ecotype refers to the habitat and
snake phenotype. L denotes a Lakeshore habitat, M
denotes a Meadow habitat
Fig. 1 (TOP) Ecotypes of garter snake found at
Eagle Lake. The checkered snake represents the
Lake Shore ecotype, the black and yellow striped
snake represents the Meadow Ecotype. (BOTTOM) Map
of locations in the study. Red dots denote the
lakeshore locations the blue dot denotes the
mountain meadow location.
  • Acknowledgements
  • NSF Plant Genome Research Program
  • http//www.eeob.iastate.edu/faculty/BronikoA/homep
    age.html
Write a Comment
User Comments (0)