Title: Powerpoint template for scientific posters (Swarthmore College)
1Population genetics in western garter
snakes Courtney Wolken¹, Megan Manes², Tonia
Schwartz², Anne Bronikowski² ¹Newton High
School, Newton, IA ²Department of Ecology,
Evolution, and Organismal Biology Iowa State
University, Ames, IA
- Results
- A total of 88 samples were successfully
genotyped. (see Table 1) - One locus was dropped from analysis because it
was out of Hardy Weinberg equilibrium in all four
populations. - In comparing levels of genetic diversity, Stones
(ST) had the lowest heterozygosity and fewest
alleles. - Fst values were significantly different among
many locations. Stones had the most genetic
divergence. (Table2) -
- Questions
- Previous research has identified morphological
and physiological differences between the
ecotypes (Lakeshore versus Meadow), based on
common garden experiments. This variation has
both a genetic and environmental basis. We
address the following questions as the first step
to understanding the genetic basis for these
differences. - Do the populations vary in their amount of
genetic diversity? - 2. Are the populations genetically different?
- Conclusions
- We found significant genetic structure among the
four populations. - This structure was significant within the lake as
well as between Lake and Meadow locations. - The degree of structure was similar to the
previous study on other locations around Eagle
Lake. - Of the four populations, Stones is the most
genetically distinct and also has the least
genetic diversity. - Future Directions
- Extend the study to include four additional
locations. - Determine if multiple paternity is present in
garter snakes, and if so, to what extent. - Determine if the degree of multiple paternity in
the studied populations of garter snakes is
strongly linked to the life history traits
defined by the differing ecotypes. -
Introduction Eagle Lake, California provides
habitats for two different ecotypes of
terrestrial Gartner snake, Thamnophis elegans.
Based on location they have evolved differing
life history traits. Lakeshore ecotype fast
growth, early maturation, short lifespan, found
at low elevations Meadow ecotype slow growth,
late maturation, long lifespan, found at higher
elevations.
- Methods
- DNA was isolated from blood samples collected at
four separate locations. - Samples were Nanodropped to ensure proper
concentrations of DNA. - PCR reactions were run using eight different
microsatellite loci with fluorescent-labels
(neutral genetic markers). - Gel electrophoresis was used to confirm a
successful PCR reaction. - Genotyping was performed by Iowa State University
DNA facility and scored using Genemapper. - Population parameters were calculated using
Arlequin, Genepop, Genalex, and Structure. - In testing each locus for Hardy Weinberg
equilibrium, locus TelCa3 was dropped from the
project.
Table 2 Pairwise Fst values indicates P-value
lt 0.01 indicates P-value lt 0.001
ML
SM
- Literature cited
- Manier, M.K. and Arnold S.J. 2006 Ecological
correlates of population genetic structure a
comparative approach using a vertebrate
metacommunity.. Proc. R. Soc. B - Uller, T. and Olsson M. 2008 Multiple paternity
in reptiles patterns and processes. Molecular
Ecology 17. - Bronikowski, A. and Arnold S. 1999 The
evolutionary ecology of life-history variation in
the garter snake Thamnophis elegans. Ecology 80.
- Using Bayesian statistics, the program Structure
was able to group the individuals into genetic
populations (Fig. 2).
GAL
ST
Fig. 2. Graphical representation from
Structure. SM ST ML GA
Table 1. Sites, codes, ecotypes, sample sizes,
and measures of genetic diversity for the studied
locations. Ecotype refers to the habitat and
snake phenotype. L denotes a Lakeshore habitat, M
denotes a Meadow habitat
Fig. 1 (TOP) Ecotypes of garter snake found at
Eagle Lake. The checkered snake represents the
Lake Shore ecotype, the black and yellow striped
snake represents the Meadow Ecotype. (BOTTOM) Map
of locations in the study. Red dots denote the
lakeshore locations the blue dot denotes the
mountain meadow location.
- Acknowledgements
- NSF Plant Genome Research Program
- http//www.eeob.iastate.edu/faculty/BronikoA/homep
age.html