thousands of degrees of freedom (DOF) ... Surface representation, that efficiently represents the docking surface and ... First satisfy steric constraints...
Docking Programs DOCK as an Example DOCK as an Example DOCK as an Example The DOCK Algorithm Slide 31 Site Points Generation in DOCK The Matching Other Docking ...
'Protein-Protein Docking with Simultaneous Optimization of Rigid-body ... the protein backbones using a rotameter packing algorithm, thus changing the energy surface ...
Modeling conformational changes during docking Martin Zacharias Physik-Department T38 Technische Universit t M nchen ALGORITHMS IN STRUCTURAL BIOINFORMATICS ...