576 Paralogs PPTs View free & download

Homologs, Orthologs and Paralogs PowerPoint PPT Presentation

Homologs, Orthologs and Paralogs - Homologs, Orthologs and Paralogs Identifying changes in the genome requires resolving evolutionary relationships for all bases. Homologues: Common descent from an ...

Homologs, Orthologs and Paralogs Identifying changes in the genome requires resolving evolutionary relationships for all bases. Homologues: Common descent from an ...

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Evolution of paralogous proteins PowerPoint PPT Presentation

Evolution of paralogous proteins - Another PDH E1a locus is found on chromosome 4: ... Single UDPTG1 gene complex on chromosome 2 has diversified by duplication only ...

Another PDH E1a locus is found on chromosome 4: ... Single UDPTG1 gene complex on chromosome 2 has diversified by duplication only ...

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Aucun titre de diapositive PowerPoint PPT Presentation

Aucun titre de diapositive - ... concepts of evolutionary biology in genome annotation. Comparative genomics, concept of orthology and paralogy. What is phylogenomics? ... Orthology/ Paralogy ...

... concepts of evolutionary biology in genome annotation. Comparative genomics, concept of orthology and paralogy. What is phylogenomics? ... Orthology/ Paralogy ...

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Evolutionary Biology Concepts PowerPoint PPT Presentation

Evolutionary Biology Concepts - 'In fact, evolution can be precisely defined as any change in the ... Homology, Orthology, Paralogy. Orthologs. Paralogs. Paralogy Trap. Improper Inference ...

'In fact, evolution can be precisely defined as any change in the ... Homology, Orthology, Paralogy. Orthologs. Paralogs. Paralogy Trap. Improper Inference ...

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Bioinformatics%20and%20Evolutionary%20Genomics%20The%20tree%20of%20life%20/%20HGT%20,%20origin%20of%20eukaryotes PowerPoint PPT Presentation

Bioinformatics%20and%20Evolutionary%20Genomics%20The%20tree%20of%20life%20/%20HGT%20,%20origin%20of%20eukaryotes - How to root the tree of life? 2: Make a tree of paralogs that ... Catabolism of fatty acids, glycerol and amino acids. - Some pathways are not mitochondrial. ...

How to root the tree of life? 2: Make a tree of paralogs that ... Catabolism of fatty acids, glycerol and amino acids. - Some pathways are not mitochondrial. ...

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Similarity vs. Homology PowerPoint PPT Presentation

Sir Richard Owen, Lectures on the Comparative Anatomy and Physiology of the ... Orthology. Orthologs: Hemoglobin A. Sharing a Common Ancestor: Paralogy ...

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What are orthologs PowerPoint PPT Presentation

What are orthologs - How should MODs represent orthology, similarity, paralogy? ... groups to periodically compute orthology relationships according to their own ...

How should MODs represent orthology, similarity, paralogy? ... groups to periodically compute orthology relationships according to their own ...

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Gene Duplication PowerPoint PPT Presentation

Gene Duplication - Cones and Rods. Rod cells are responsible for vision at low ... Rat 2. Orthologous genes are usually more similar in terms of function than paralogous ones! ...

Cones and Rods. Rod cells are responsible for vision at low ... Rat 2. Orthologous genes are usually more similar in terms of function than paralogous ones! ...

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Bioinformatics Course Outline PowerPoint PPT Presentation

Bioinformatics Course Outline - Homologue finding, sequence alignment, multiple alignment, phylogeny trees. 2 ... Homologues: Orthology vs Paralogy. Reproduced from NCBI education website. Intro. ...

Homologue finding, sequence alignment, multiple alignment, phylogeny trees. 2 ... Homologues: Orthology vs Paralogy. Reproduced from NCBI education website. Intro. ...

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Comparative genomics and proteomics in Ensembl PowerPoint PPT Presentation

Comparative genomics and proteomics in Ensembl - Comparative genomics and proteomics in Ensembl. November 2004 ... The Compara database is one single multispecies database. Gene orthology/paralogy prediction ...

Comparative genomics and proteomics in Ensembl. November 2004 ... The Compara database is one single multispecies database. Gene orthology/paralogy prediction ...

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Presentazione di PowerPoint PowerPoint PPT Presentation

Presentazione di PowerPoint - E-Figure 1. Alignment of DNM2 orthologs and paralogs spanning PH from amino acids 516-577.

E-Figure 1. Alignment of DNM2 orthologs and paralogs spanning PH from amino acids 516-577.

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Bioinformatics for Genomic and Proteomic data analysis PowerPoint PPT Presentation

Bioinformatics for Genomic and Proteomic data analysis - Predicting phyico-chemical properties of protein (ProtParam) ... frog A chick A mouse A. mouse B chick B frog B. paralogs. orthologs orthologs. gene duplication ...

Predicting phyico-chemical properties of protein (ProtParam) ... frog A chick A mouse A. mouse B chick B frog B. paralogs. orthologs orthologs. gene duplication ...

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Tree Pattern Matching in Phylogenetic Trees PowerPoint PPT Presentation

Tree Pattern Matching in Phylogenetic Trees - Create algorithms that allow for automatic searching for orthologs or paralogs ... into clusters of orthologs depends on evolutionary distance between species ...

Create algorithms that allow for automatic searching for orthologs or paralogs ... into clusters of orthologs depends on evolutionary distance between species ...

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Bioinformatics Course Outline - Gene prediction and promoter analysis, sequence assembly and primer design. 4 ... Homologues: Orthology vs Paralogy. Reproduced from NCBI education website. Intro. ...

Gene prediction and promoter analysis, sequence assembly and primer design. 4 ... Homologues: Orthology vs Paralogy. Reproduced from NCBI education website. Intro. ...

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Models of sequence evolution PowerPoint PPT Presentation

Models of sequence evolution - Mutations in the genetic material that are passed to the progeny (offspring) ... BASIC CONCEPTS UP TO THIS POINT: HOMOLOGY, ORTHOLOGY, PARALOGY ' ...

Mutations in the genetic material that are passed to the progeny (offspring) ... BASIC CONCEPTS UP TO THIS POINT: HOMOLOGY, ORTHOLOGY, PARALOGY ' ...

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Detecting and Interpreting Genetic Homology PowerPoint PPT Presentation

Detecting and Interpreting Genetic Homology - 'The same organ in different animals under a variety of form and ... Orthology. Protein Orthology. Sharing a Common Ancestor: Paralogy. Functional Conservation ...

'The same organ in different animals under a variety of form and ... Orthology. Protein Orthology. Sharing a Common Ancestor: Paralogy. Functional Conservation ...

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Network Biology: understanding the cells functional organization PowerPoint PPT Presentation

Network Biology: understanding the cells functional organization - Orthology. Paralogy. 3. Graph Terminology. Node. Edge. Directed/Undirected. Degree ... The color of a node indicates the phenotypic effect of removing the ...

Orthology. Paralogy. 3. Graph Terminology. Node. Edge. Directed/Undirected. Degree ... The color of a node indicates the phenotypic effect of removing the ...

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Example: Ortholog Prediction PowerPoint PPT Presentation

Example: Ortholog Prediction - the same gene in two species', typically, same function. Paralogs: two genes related by at least one ... Catalase peroxidase in E. coli, yeast, Synechocystis, ...

the same gene in two species', typically, same function. Paralogs: two genes related by at least one ... Catalase peroxidase in E. coli, yeast, Synechocystis, ...

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KVL bioinformatics. PowerPoint PPT Presentation

KVL bioinformatics. - Der arbejdes kun lidt med udvikling af ... Orthology (ortho-, exact) ... Homology (including orthology and paralogy) is a. property that cannot be measured. ...

Der arbejdes kun lidt med udvikling af ... Orthology (ortho-, exact) ... Homology (including orthology and paralogy) is a. property that cannot be measured. ...

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Substitution Patterns PowerPoint PPT Presentation

Substitution Patterns - r=rate of substitution (# substitutions/site/year) ... http://www.ncbi.nlm.nih.gov/Education/BLASTinfo/Orthology.html. Pseudogenes. Paralogous homology? ...

r=rate of substitution (# substitutions/site/year) ... http://www.ncbi.nlm.nih.gov/Education/BLASTinfo/Orthology.html. Pseudogenes. Paralogous homology? ...

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Alignment methods PowerPoint PPT Presentation

Alignment methods - Learning objectives- Understand difference between identity, similarity and homology. ... Analogous to railroad car and diner function. Orthologs vs Paralogs ...

Learning objectives- Understand difference between identity, similarity and homology. ... Analogous to railroad car and diner function. Orthologs vs Paralogs ...

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Bioinformatics and Proteomics PowerPoint PPT Presentation

Bioinformatics and Proteomics - Myo (Cod) HbA (Cod) HbB (Cod) Myo (Frog) HbA (Frog) HbB (Frog) Myo (Rat) ... LCA of Vertebrata. Orthologs and Paralogs. Myo (Cod) HbA (Cod) HbB (Cod) Myo (Frog) ...

Myo (Cod) HbA (Cod) HbB (Cod) Myo (Frog) HbA (Frog) HbB (Frog) Myo (Rat) ... LCA of Vertebrata. Orthologs and Paralogs. Myo (Cod) HbA (Cod) HbB (Cod) Myo (Frog) ...

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CSE700 Parallel Programming Assignment 6 PowerPoint PPT Presentation

CSE700 Parallel Programming Assignment 6 - Cluster. Si' 12. Output. Assume a total of n species S1, S2, ..., Sn ... In each cluster, seed ortholog from each pair of species. paralogs may be included. ...

Cluster. Si' 12. Output. Assume a total of n species S1, S2, ..., Sn ... In each cluster, seed ortholog from each pair of species. paralogs may be included. ...

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MOST OF BIOLOGY IS LOOKING FOR SIGNALS PowerPoint PPT Presentation

MOST OF BIOLOGY IS LOOKING FOR SIGNALS - EVOLUTIONARY ( HOW IT CAME TO BE LIKE IT IS ) ... ORTHOLOGY / PARALOGY IS ESTABLISHED AFTER 'FUNCTIONAL HOMOLOGY' USUALLY DOES NOT MAKE SENSE ...

EVOLUTIONARY ( HOW IT CAME TO BE LIKE IT IS ) ... ORTHOLOGY / PARALOGY IS ESTABLISHED AFTER 'FUNCTIONAL HOMOLOGY' USUALLY DOES NOT MAKE SENSE ...

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RCNE 33 and Fish SINE31 PowerPoint PPT Presentation

RCNE 33 and Fish SINE31 - SINE3-1. Human. Mouse. Rat. Dog. Elephant. Armadillo. Rabbit. Opossum ... a) Alignment of paralogous human sequences and SINE3-1. ...

SINE3-1. Human. Mouse. Rat. Dog. Elephant. Armadillo. Rabbit. Opossum ... a) Alignment of paralogous human sequences and SINE3-1. ...

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Uncovering evolutionary history: new methods for inferring phylogenies PowerPoint PPT Presentation

Uncovering evolutionary history: new methods for inferring phylogenies - Biologists want to reconstruct the evolutionary history of ... Cassowary. Kiwi. Ostrich. Rhea. Biological Data. Morphological information. Paralogous genes ...

Biologists want to reconstruct the evolutionary history of ... Cassowary. Kiwi. Ostrich. Rhea. Biological Data. Morphological information. Paralogous genes ...

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NCBI Molecular Biology Resources PowerPoint PPT Presentation

NCBI Molecular Biology Resources - Using limits and field restriction to find human MutL ... frog A chick A mouse A. mouse B chick B frog B. paralogs. orthologs orthologs. gene duplication ...

Using limits and field restriction to find human MutL ... frog A chick A mouse A. mouse B chick B frog B. paralogs. orthologs orthologs. gene duplication ...

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Nessun titolo diapositiva PowerPoint PPT Presentation

Nessun titolo diapositiva - Bioinformatics: Science that derives information from computer analysis ... Orthology, homology, paralogy, analogy and xenology. rFGF2 and chFGF2 are orthologs ...

Bioinformatics: Science that derives information from computer analysis ... Orthology, homology, paralogy, analogy and xenology. rFGF2 and chFGF2 are orthologs ...

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Aucun titre de diapositive - ... gene (PSPTO0599/hutH-1) is a putative ortholog' to ACIAD0574 and is involved in ... 2 and 5276/ hutH-3) are similar to ACIAD0574 (putative paralogs of PSPTO0599) ...

... gene (PSPTO0599/hutH-1) is a putative ortholog' to ACIAD0574 and is involved in ... 2 and 5276/ hutH-3) are similar to ACIAD0574 (putative paralogs of PSPTO0599) ...

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BORIS poster PowerPoint PPT Presentation

BORIS poster - The paralogous gene pair CTCF and BORIS may act as an antagonistically regulated ' ... BORIS is normally only expressed in primary spermatocytes, and should not be ...

The paralogous gene pair CTCF and BORIS may act as an antagonistically regulated ' ... BORIS is normally only expressed in primary spermatocytes, and should not be ...

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Molecular Chaperones PowerPoint PPT Presentation

Molecular Chaperones - Molecular Chaperones The Hsp70 Super-family Pathways For Protein Folding Protein Folding in Cells Occurs in a Crowded Environment where Misfolding & Aggregation are ...

Molecular Chaperones The Hsp70 Super-family Pathways For Protein Folding Protein Folding in Cells Occurs in a Crowded Environment where Misfolding & Aggregation are ...

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Orthology%20Analysis PowerPoint PPT Presentation

Orthology%20Analysis - ... OrthoMCL OrthoMCL (blast) proteomes HOPS Orthostrapper (tree) Pfam RIO (tree) Pfam TOGA/EGO COGs (blast) TIGR gene index COGs / KOGs COGs (blast) ...

... OrthoMCL OrthoMCL (blast) proteomes HOPS Orthostrapper (tree) Pfam RIO (tree) Pfam TOGA/EGO COGs (blast) TIGR gene index COGs / KOGs COGs (blast) ...

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Cryptic Variation in the Human mutation rate PowerPoint PPT Presentation

Cryptic Variation in the Human mutation rate - Cryptic Variation in the Human mutation rate Alan Hodgkinson Adam Eyre-Walker, Manolis Ladoukakis

Cryptic Variation in the Human mutation rate Alan Hodgkinson Adam Eyre-Walker, Manolis Ladoukakis

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Orthology Analysis PowerPoint PPT Presentation

Orthology Analysis - Pairwise orthology confidence by orthostrapping' ... Orthology is not transitive! ... 286356 pairwise orthology assignments ( 75% orthostrap) ...

Pairwise orthology confidence by orthostrapping' ... Orthology is not transitive! ... 286356 pairwise orthology assignments ( 75% orthostrap) ...

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Ohnologs and Regulatory Networks PowerPoint PPT Presentation

Ohnologs and Regulatory Networks - Of those, 102 TF's had enough hits to ... Duplicated Iron Pathway? ... Synthetic Lethal interactions. Protein-Protein interactions (Y2H) Domain information ...

Of those, 102 TF's had enough hits to ... Duplicated Iron Pathway? ... Synthetic Lethal interactions. Protein-Protein interactions (Y2H) Domain information ...

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Nothing in (computational) biology makes PowerPoint PPT Presentation

Nothing in (computational) biology makes - Title: No Slide Title Author: Michael Fetchko Last modified by: Michael Fetchko Created Date: 11/20/2002 3:37:49 PM Document presentation format: On-screen Show

Title: No Slide Title Author: Michael Fetchko Last modified by: Michael Fetchko Created Date: 11/20/2002 3:37:49 PM Document presentation format: On-screen Show

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BS961 - Applications of sequence database searches to generate useful biological ... gi|16878176|gb|AAH17293.1|AAH17293 (BC017293) moesin [Homo sapiens] Length = 577 ...

Applications of sequence database searches to generate useful biological ... gi|16878176|gb|AAH17293.1|AAH17293 (BC017293) moesin [Homo sapiens] Length = 577 ...

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Sequence Variation Informatics PowerPoint PPT Presentation

Sequence Variation Informatics - Seminar talk given at the Childrens Hospital Informatics Program, 10-02-2003.

Seminar talk given at the Childrens Hospital Informatics Program, 10-02-2003.

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Xenolog: Homologs resulting from horizontal gene transfer PowerPoint PPT Presentation

Xenolog: Homologs resulting from horizontal gene transfer - Orthologs diverged only after speciation tend to have ... Nucleic acids. proteins. BIOMOLECULES!! LEARN TO USE THE INFORMATION THAT IS ALREADY OUT THERE! ...

Orthologs diverged only after speciation tend to have ... Nucleic acids. proteins. BIOMOLECULES!! LEARN TO USE THE INFORMATION THAT IS ALREADY OUT THERE! ...

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Pr - Grouping homologous modules. in families. S. Cohen Boulakia, Ch. ... Homologous modules. Measuring evolutionary. distance separating species. Needs. Asking ...

Grouping homologous modules. in families. S. Cohen Boulakia, Ch. ... Homologous modules. Measuring evolutionary. distance separating species. Needs. Asking ...

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Welcome to General Biochemistry BCH 3033 PowerPoint PPT Presentation

Welcome to General Biochemistry BCH 3033 - Title: PowerPoint Presentation Author: t w Last modified by: John Makemson Created Date: 12/24/2002 1:08:46 AM Document presentation format: On-screen Show (4:3)

Title: PowerPoint Presentation Author: t w Last modified by: John Makemson Created Date: 12/24/2002 1:08:46 AM Document presentation format: On-screen Show (4:3)

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PART III. MACROEVOLUTION PowerPoint PPT Presentation

PART III. MACROEVOLUTION - PART III. MACROEVOLUTION We already considered History of Life and learned a lot about Macroevolution that occurred in the past - but only at the shallow level of ...

PART III. MACROEVOLUTION We already considered History of Life and learned a lot about Macroevolution that occurred in the past - but only at the shallow level of ...

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Protein Bioinformatics Course PowerPoint PPT Presentation

Protein Bioinformatics Course - Protein Bioinformatics Course Matthew Betts & Rob Russell AG Russell (Protein Evolution) Course overview Day 1 - Modularity Day 2 - Interactions Day 3 - Modularity ...

Protein Bioinformatics Course Matthew Betts & Rob Russell AG Russell (Protein Evolution) Course overview Day 1 - Modularity Day 2 - Interactions Day 3 - Modularity ...

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CS273A Computational Tour of the Human Genome, Gill Bejerano, Spring 2006/07 PowerPoint PPT Presentation

CS273A Computational Tour of the Human Genome, Gill Bejerano, Spring 2006/07 - Profs: Serafim Batzoglou, Gill Bejerano TAs: George Asimenos, Cory McLean http://cs273a.stanford.edu [Bejerano Spr06/07]*

Profs: Serafim Batzoglou, Gill Bejerano TAs: George Asimenos, Cory McLean http://cs273a.stanford.edu [Bejerano Spr06/07]*

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Analyses phylog PowerPoint PPT Presentation

Analyses phylog - Analyses phylog n tiques Inf rer et tudier l'histoire volutive des g nes Jean-Fran ois Dufayard (CIRAD, quipe ID) Histoire volutive des esp ces ...

Analyses phylog n tiques Inf rer et tudier l'histoire volutive des g nes Jean-Fran ois Dufayard (CIRAD, quipe ID) Histoire volutive des esp ces ...

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Benchmarking%20Orthology%20in%20Eukaryotes PowerPoint PPT Presentation

Benchmarking%20Orthology%20in%20Eukaryotes - ... analysis, examination of large COGs (might be split up) ... Tatusov et al., 'The COG database: an updated version includes eukaryotes', BMC Bioinformatics. ...

... analysis, examination of large COGs (might be split up) ... Tatusov et al., 'The COG database: an updated version includes eukaryotes', BMC Bioinformatics. ...

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Phylogenetic Trees PowerPoint PPT Presentation

Phylogenetic Trees - Orthology : two genes are orthologous iff. they diverged following a speciation event. ... Orthology functional equivalence. Primates. Rodents. Human. ancestral ...

Orthology : two genes are orthologous iff. they diverged following a speciation event. ... Orthology functional equivalence. Primates. Rodents. Human. ancestral ...

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Single Nucleotide Polymorphism PowerPoint PPT Presentation

Single Nucleotide Polymorphism - Single Nucleotide Polymorphism. Anshu Bhardwaj. Research Fellow ... (http://zebrafish.doc.ic.ac.uk/Sean/) SNP Finder: For analyzing user-submitted. trace data ...

Single Nucleotide Polymorphism. Anshu Bhardwaj. Research Fellow ... (http://zebrafish.doc.ic.ac.uk/Sean/) SNP Finder: For analyzing user-submitted. trace data ...

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micro RNA - Title: Slide 1 Author: arielj Last modified by: arielj Created Date: 11/16/2005 2:00:43 PM Document presentation format: On-screen Show Company: Hebrew University

Title: Slide 1 Author: arielj Last modified by: arielj Created Date: 11/16/2005 2:00:43 PM Document presentation format: On-screen Show Company: Hebrew University

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Introduction to HomoloGene PowerPoint PPT Presentation

Introduction to HomoloGene - The extent to which nucleotide or protein sequences are related. ... Orthology describes genes in different species that derive from a common ancestor. ...

The extent to which nucleotide or protein sequences are related. ... Orthology describes genes in different species that derive from a common ancestor. ...

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Evolution - Doug Raiford Lesson 4

Doug Raiford Lesson 4

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Table 8.3 - Title: Slide 1 Author: COEMASTER Last modified by: Linda Bonen Created Date: 3/23/2003 10:43:24 PM Document presentation format: On-screen Show (4:3)

Title: Slide 1 Author: COEMASTER Last modified by: Linda Bonen Created Date: 3/23/2003 10:43:24 PM Document presentation format: On-screen Show (4:3)

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Issues When Dealing with Polyploids - Issues When Dealing with Polyploids

Issues When Dealing with Polyploids

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LECTURE 1: Phylogeny and Systematics - LECTURE 1: Phylogeny and Systematics

LECTURE 1: Phylogeny and Systematics

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Genome Analysis II Comparative Genomics PowerPoint PPT Presentation

Genome Analysis II Comparative Genomics - Group the worm seqs that match the yeast query seq with a high P value (10-10 to ... From the group made in 2, choose a worm seq and make a search of the yeast ...

Group the worm seqs that match the yeast query seq with a high P value (10-10 to ... From the group made in 2, choose a worm seq and make a search of the yeast ...

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Development of the Tetrapod Limb PowerPoint PPT Presentation

Development of the Tetrapod Limb - Development of the Tetrapod Limb BIOL 370 Developmental Biology (Chapter 13 9th Edition; Chapter 14 10th edition) Lange DevBio9e-Fig-13-05-0.jpg DevBio9e-Fig-13 ...

Development of the Tetrapod Limb BIOL 370 Developmental Biology (Chapter 13 9th Edition; Chapter 14 10th edition) Lange DevBio9e-Fig-13-05-0.jpg DevBio9e-Fig-13 ...

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Paralogs PowerPoint PPT Presentations